Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72620 | Canola | cytosol | 81.54 | 84.71 |
| Bra017799.1-P | Field mustard | cytosol | 80.61 | 83.74 |
| CDY42720 | Canola | cytosol | 76.87 | 79.66 |
| CDX75621 | Canola | cytosol | 75.0 | 78.87 |
| CDX69271 | Canola | cytosol | 74.3 | 78.13 |
| Bra011732.1-P | Field mustard | cytosol | 68.22 | 76.44 |
| KRH28482 | Soybean | cytosol | 58.18 | 61.79 |
| VIT_07s0031g00860.t01 | Wine grape | cytosol | 57.94 | 60.78 |
| VIT_07s0031g00870.t01 | Wine grape | cytosol | 56.54 | 59.46 |
| PGSC0003DMT400040781 | Potato | cytosol | 55.37 | 59.4 |
| Solyc02g090630.2.1 | Tomato | cytosol | 54.21 | 58.73 |
| AT4G37070.2 | Thale cress | cytosol, peroxisome, plastid | 56.54 | 58.45 |
| VIT_07s0031g00850.t01 | Wine grape | cytosol, peroxisome, plastid | 54.44 | 57.96 |
| AT2G26560.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 52.57 | 55.28 |
| GSMUA_Achr3P06850_001 | Banana | cytosol | 52.34 | 54.9 |
| AT4G37060.2 | Thale cress | cytosol, golgi, plastid | 56.07 | 53.93 |
| AT5G43590.2 | Thale cress | mitochondrion | 49.3 | 45.09 |
| AT3G63200.1 | Thale cress | cytosol | 21.26 | 23.7 |
| AT2G39220.1 | Thale cress | cytosol | 27.1 | 23.25 |
| AT3G54950.1 | Thale cress | mitochondrion | 25.93 | 22.75 |
| AT4G29800.2 | Thale cress | cytosol | 25.0 | 20.34 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | EntrezGene:829859 | ProteinID:AEE86741.1 | ArrayExpress:AT4G37050 | EnsemblPlantsGene:AT4G37050 |
| RefSeq:AT4G37050 | TAIR:AT4G37050 | RefSeq:AT4G37050-TAIR-G | EnsemblPlants:AT4G37050.1 | TAIR:AT4G37050.1 | EMBL:AY099596 |
| EMBL:AY128840 | InterPro:Acyl_Trfase/lysoPLipase | Unigene:At.48948 | ProteinID:CAB16789.1 | ProteinID:CAB80371.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004620 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009719 | GO:GO:0009737 | GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0047372 |
| InterPro:IPR002641 | RefSeq:NP_195422.3 | UniProt:O23181 | PFAM:PF01734 | Symbol:PLP4 | InterPro:PNPLA_dom |
| PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0009062 | PO:PO:0025022 | PFscan:PS51635 | PANTHER:PTHR32176 |
| PANTHER:PTHR32176:SF24 | SUPFAM:SSF52151 | UniParc:UPI00000A9341 | SEG:seg | : | : |
Description
PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
Coordinates
chr4:-:17457135..17459770
Molecular Weight (calculated)
47206.5 Da
IEP (calculated)
6.126
GRAVY (calculated)
-0.197
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.