Factsheet for AT4G37070.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011730.1-P	Field mustard	cytosol	83.82	85.05
CDX75619	Canola	cytosol	83.33	84.56
CDX72619	Canola	cytosol	82.37	83.58
Bra017798.1-P	Field mustard	cytosol	82.13	83.33
CDX69269	Canola	cytosol	83.33	83.13
CDX75620	Canola	cytosol, peroxisome, plastid	78.99	80.74
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	78.99	80.74
CDX69270	Canola	cytosol, peroxisome, plastid	78.74	80.49
AT4G37060.2	Thale cress	cytosol, golgi, plastid	86.23	80.22
PGSC0003DMT400040781	Potato	cytosol	57.0	59.15
VIT_07s0031g00860.t01	Wine grape	cytosol	57.97	58.82
KRH28482	Soybean	cytosol	57.25	58.81
Solyc02g090630.2.1	Tomato	cytosol	54.83	57.47
AT4G37050.1	Thale cress	cytosol	58.45	56.54
VIT_07s0031g00870.t01	Wine grape	cytosol	54.83	55.77
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	53.86	55.47
AT5G43590.2	Thale cress	mitochondrion	61.59	54.49
AT2G26560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.9	53.81
GSMUA_Achr3P06850_001	Banana	cytosol	51.69	52.45
CDY42719	Canola	cytosol	82.61	48.03
AT3G63200.1	Thale cress	cytosol	22.22	23.96
AT2G39220.1	Thale cress	cytosol	26.81	22.24
AT3G54950.1	Thale cress	mitochondrion	26.09	22.13
AT4G29800.2	Thale cress	cytosol	26.33	20.72

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	EntrezGene:829861	UniProt:A0A178UVZ8	ProteinID:AEE86744.1	ProteinID:AEE86745.1
ProteinID:AEE86746.1	EMBL:AJ002596	ArrayExpress:AT4G37070	EnsemblPlantsGene:AT4G37070	RefSeq:AT4G37070	TAIR:AT4G37070
RefSeq:AT4G37070-TAIR-G	EnsemblPlants:AT4G37070.2	TAIR:AT4G37070.2	EMBL:AY087005	InterPro:Acyl_Trfase/lysoPLipase	Unigene:At.23952
EMBL:BT029750	ProteinID:CAB16787.1	ProteinID:CAB80373.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004620
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006950
GO:GO:0006952	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009653
GO:GO:0009791	GO:GO:0010311	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0047372
InterPro:IPR002641	RefSeq:NP_568015.1	RefSeq:NP_849511.1	RefSeq:NP_849512.3	UniProt:O23179	ProteinID:OAO97793.1
PFAM:PF01734	Symbol:PLP1	InterPro:PNPLA_dom	PO:PO:0009005	PFscan:PS51635	PANTHER:PTHR32176
PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	UniParc:UPI00000A1F00	SEG:seg	:	:

Description

PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]

Coordinates

chr4:-:17464594..17467186

Molecular Weight (calculated)

45826.2 Da

IEP (calculated)

6.801

GRAVY (calculated)

-0.284

Length

414 amino acids

Sequence
(BLAST)

001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.