Factsheet for Bra011730.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75619	Canola	cytosol	99.26	99.26
CDX69269	Canola	cytosol	97.79	96.14
Bra017798.1-P	Field mustard	cytosol	86.03	86.03
AT4G37070.2	Thale cress	cytosol, peroxisome, plastid	85.05	83.82
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	79.66	80.25
AT4G37060.2	Thale cress	cytosol, golgi, plastid	80.15	73.48
Bra017799.1-P	Field mustard	cytosol	59.31	58.74
VIT_07s0031g00860.t01	Wine grape	cytosol	58.58	58.58
KRH28482	Soybean	cytosol	57.11	57.82
PGSC0003DMT400040781	Potato	cytosol	56.37	57.64
Solyc02g090630.2.1	Tomato	cytosol	54.9	56.71
VIT_07s0031g00870.t01	Wine grape	cytosol	55.88	56.02
Bra011732.1-P	Field mustard	cytosol	52.21	55.76
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	54.9	55.72
GSMUA_Achr3P06850_001	Banana	cytosol	51.72	51.72
Bra000578.1-P	Field mustard	cytosol	50.98	51.36
Bra040428.1-P	Field mustard	cytosol	23.77	25.06
Bra000125.1-P	Field mustard	cytosol	28.92	24.43
Bra005058.1-P	Field mustard	cytosol	28.92	24.23
Bra007735.1-P	Field mustard	cytosol	22.79	24.16
Bra003202.1-P	Field mustard	mitochondrion	26.47	22.69
Bra007119.1-P	Field mustard	mitochondrion	27.21	22.38

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:Bra011730	EnsemblPlants:Bra011730.1	EnsemblPlants:Bra011730.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	UniProt:M4D5H3	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	UniParc:UPI00025467E5	SEG:seg

Description

AT4G37070 (E=2e-184) PLP1, PLA IVA | patatin, putative

Coordinates

chrA01:-:845421..847871

Molecular Weight (calculated)

45025.4 Da

IEP (calculated)

8.046

GRAVY (calculated)

-0.274

Length

408 amino acids

Sequence
(BLAST)

001: MEDGSSCKKN KPPSWGKLVT ILSLDGGGVR GIIAGVILAY LEKQLQEIDG EDVRLADYFD VVSGTSTGGL MTAMLTVPGK NGRPQLAAKD IVPFYLEHCP
101: KIFPQPEGLA ALLPKLPKLL SGPKYSGKYL RKLLSKLLGE TKLHQTVTNV VIPTFDMKKL QPTIFSSYQA LVDPSLDVKI SDICLGTSAA PTFFPPHYFS
201: NEDSQGKTTE FNLVDGAVTA NNPTLVAMTA VTKQILKNNP DMGKLKPLGY DKFLVISIGT GSSKNEEKYS AKKAAKWGII SWLYNDGSTP ILDMVSDSGR
301: DMIHFHSSVL FKALQSEDKY LRIDDDTLEG DVSSMDLATK SNLENLVKIG EKVLKNRVMH MNIDTGVYEP ITENITNEEE LKRFAKILSD ERRLRRMRSQ
401: TMVQDPSN

Best Arabidopsis Sequence Match ( AT4G37070.2 )
(BLAST)

001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK

Arabidopsis Description

PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.