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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • mitochondrion 2
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75621 Canola cytosol 96.07 90.17
CDX69271 Canola cytosol 92.41 86.73
Bra017799.1-P Field mustard cytosol 81.15 75.24
AT4G37050.1 Thale cress cytosol 76.44 68.22
VIT_07s0031g00860.t01 Wine grape cytosol 59.95 56.13
KRH28482 Soybean cytosol 56.81 53.85
VIT_07s0031g00870.t01 Wine grape cytosol 57.33 53.81
Solyc02g090630.2.1 Tomato cytosol 55.5 53.67
PGSC0003DMT400040781 Potato cytosol 56.02 53.63
VIT_07s0031g00850.t01 Wine grape cytosol, peroxisome, plastid 55.5 52.74
Bra011730.1-P Field mustard cytosol 55.76 52.21
Bra011731.1-P Field mustard cytosol, peroxisome, plastid 54.45 51.36
Bra000578.1-P Field mustard cytosol 53.93 50.86
Bra017798.1-P Field mustard cytosol 54.19 50.74
GSMUA_Achr3P06850_001 Banana cytosol 52.62 49.26
Bra005058.1-P Field mustard cytosol 28.53 22.38
Bra000125.1-P Field mustard cytosol 28.27 22.36
Bra003202.1-P Field mustard mitochondrion 27.75 22.27
Bra040428.1-P Field mustard cytosol 22.51 22.22
Bra007735.1-P Field mustard cytosol 21.99 21.82
Bra007119.1-P Field mustard mitochondrion 27.75 21.37
Protein Annotations
Gene3D:3.40.1090.10MapMan:5.7.2.2.3InterPro:Acyl_Trfase/lysoPLipaseEnsemblPlantsGene:Bra011732EnsemblPlants:Bra011732.1EnsemblPlants:Bra011732.1-P
GO:GO:0003674GO:GO:0003824GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0016042GO:GO:0016787InterPro:IPR002641UniProt:M4D5H5PFAM:PF01734InterPro:PNPLA_dom
PFscan:PS51635PANTHER:PTHR32176PANTHER:PTHR32176:SF24SUPFAM:SSF52151UniParc:UPI00025467E3SEG:seg
Description
AT4G37050 (E=3e-128) PLP4, PLA V | PLP4 (PATATIN-LIKE PROTEIN 4); nutrient reservoir
Coordinates
chrA01:-:836892..839199
Molecular Weight (calculated)
42134.6 Da
IEP (calculated)
5.138
GRAVY (calculated)
-0.053
Length
382 amino acids
Sequence
(BLAST)
001: MAFSSERRLC YLSPSHGQHV TILSIDGGGV RGIIPGIVLA YLESQLQELD GEEARLVDYF DVISGTSTGG LIVAMLTAPD KTNRNRPLGA FAWAQILVRL
101: VRGPKYNGKY LREVIEDFLG DTRLTQTLTN VVIPCFDIKK LQPVIFSSYQ AVSRRVTDAK ISDICLSTSA APTYLPAHRF TNEDNEGNKH EYNLIDGGIA
201: ANNPTLCAIA EVTKQIVKKN PAMGDISPLD YTRVVVISLG TGSIRNEEKY DAIMASKWGL VSWICADGSS PIIDCYNEAI QDIVDYQSCV VFQALHSETN
301: YLRIDDDTLK GDIGSVDIST EKNMDGLVEV GKALLKKNVS RVNLETGHYE PISDHVTNEE ALKRFIISFL LILKEKPSLL LM
Best Arabidopsis Sequence Match ( AT4G37050.1 )
(BLAST)
001: MDTERGSISS SEISRTAHLQ DRTVACLPPS YGQLVTILSI DGGGIRGIIP GTILAYLESQ LQELDGEEAR LVDYFDVISG TSTGGLIVAM LTAQDQSGGH
101: SRNSNRPLFE AKEIVPFYLK HSPKIFPQPR GIFCGWGETI VRLVGGPKFN GKYLHDLVEG FLGDTKLTQS LTNVVIPCFD IKKLQPVIFS SYQAVNNQAM
201: NAKLSDICIS TSAAPTFFPA HRFTNEDSEG IKHEFNLIDG GIAANNPTLC AIAEVTKQII KKNPVMGDIS PLDFTRFLVI SIGTGSIRNQ EKYNAKMASK
301: WGLMCWVFES GSTPILDCYS EAIHDMVDYQ SSVVFQALRS EKNYLRIDDD SLKGDLGSVD ISTEKNMEGL VEVGEALLKK RVSRVNLESG HYQPISENVT
401: NEEALKRFAK VLSEERKLRE SRSPKLKI
Arabidopsis Description
PLP3Patatin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O23181]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.