Factsheet for Bra040428.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003423.1-P
Bra005039.1-P
Bra007547.1-P
Bra012567.1-P
Bra013361.1-P
Bra014481.1-P
Bra017071.1-P
Bra027174.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63200.1	Bra030034.1-P	AT1G27300.1	21798944
AT3G63200.1	Bra032817.1-P	AT1G27300.1	21798944
AT3G63200.1	Bra005039.1-P	AT2G39450.1	21798944
AT3G63200.1	Bra017071.1-P	AT2G39450.1	21798944
AT3G63200.1	Bra027174.1-P	AT3G16310.1	21798944
AT3G63200.1	Bra003423.1-P	AT3G60600.1	21798944
AT3G63200.1	Bra007547.1-P	AT3G60600.1	21798944
AT3G63200.1	Bra014481.1-P	AT3G60600.1	21798944
AT3G63200.1	Bra012567.1-P	AT4G19030.1	21798944
AT3G63200.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89181	Canola	cytosol	99.74	99.74
Bra007735.1-P	Field mustard	cytosol	90.44	90.91
AT3G63200.1	Thale cress	cytosol	88.63	89.32
VIT_07s0151g01130.t01	Wine grape	cytosol	74.94	75.32
KRH32021	Soybean	cytosol	71.06	72.37
KRH71425	Soybean	cytosol	70.8	72.3
Solyc09g065240.2.1	Tomato	cytosol	68.99	69.71
PGSC0003DMT400051868	Potato	cytosol	68.73	69.63
PGSC0003DMT400033524	Potato	cytosol	67.96	69.39
KRG95536	Soybean	cytosol	66.67	67.54
KRH67210	Soybean	cytosol	68.48	66.25
Bra003202.1-P	Field mustard	mitochondrion	41.6	33.82
Bra007119.1-P	Field mustard	mitochondrion	42.64	33.27
Bra000125.1-P	Field mustard	cytosol	41.09	32.92
Bra005058.1-P	Field mustard	cytosol	40.57	32.24
Bra011730.1-P	Field mustard	cytosol	25.06	23.77
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	24.55	23.46
Bra000578.1-P	Field mustard	cytosol	24.55	23.46
Bra017799.1-P	Field mustard	cytosol	24.55	23.06
Bra017798.1-P	Field mustard	cytosol	24.29	23.04
Bra011732.1-P	Field mustard	cytosol	22.22	22.51

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:Bra040428	EnsemblPlants:Bra040428.1	EnsemblPlants:Bra040428.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	UniProt:M4FH50	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF5	SUPFAM:SSF52151	UniParc:UPI000254542E	SEG:seg

Description

AT3G63200 (E=1e-177) PLP9, PLA IIIB | PLP9 (PATATIN-LIKE PROTEIN 9); nutrient reservoir

Coordinates

chrA04:+:167029..168269

Molecular Weight (calculated)

41655.7 Da

IEP (calculated)

7.045

GRAVY (calculated)

-0.151

Length

387 amino acids

Sequence
(BLAST)

001: MEMDLSKVTL DIFTKLEQKW LSHCDTTRKT RILSIDGGGT TAIAAGASIV HLEDQIRLQT GDPHAQISDF FDIVAGTGIG GILAALLVAD DGSGRPMFTA
101: REAVKFVEEK NSELFEIRHT GVFRRSRRYS GSSMERVLQA AFRREDGKVL TMKDTCKPLL VPCYDLKTSA PFVFSRAGAS ESPSFDFELW KVCRATSATP
201: SMFKPVNVVS VDGKTSCSAV DGGLVMNNPS AAAVTHVLHN KRDFPSVNGV DDLLVLSIGN GSSSTPGRKL QRNGGCSTSC LVDIVLDGVS DTVDQMLGNA
301: FCWNRTDYVR IQVSGLTSGG DGIVGPRKTA EELLKERGVE TAPFGGKRLL TETNGERIEC FVQRLVASSL PPSPCKESAV NPLADGR

Best Arabidopsis Sequence Match ( AT3G63200.1 )
(BLAST)

001: MEMDLSKVTL DIFTKLEQKW LSHCDSSRKT RILSIDGGGT TGIVAAASIL HLEHQIRLQT GDPHAHISDF FDIVAGTGIG GILAALLVAD DGSGRPMFTA
101: RDAVKFVAEK NSELFEIRYT GVFRRNKRYS GKSMERVLET AFRREDGKVL TMKDTCKPLL VPCYDLKTSA PFVFSRAGAS ESPSFDFELW KVCRATSATP
201: SLFKPFSVVS VDGKTSCSAV DGGLVMNNPT AAAVTHVLHN KRDFPSVNGV DDLLVLSLGN GPSTMSSSPG RKLRRNGDYS TSSVVDIVVD GVSDTVDQML
301: GNAFCWNRTD YVRIQANGLT SGGAEELLKE RGVETAPFGV KRILTESNGE RIEGFVQRLV ASGKSSLPPS PCKESAVNPL ADGR

Arabidopsis Description

PLP9Probable inactive patatin-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.