CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97393
KRH01581
KRH09922
KRH11076
KRH21197
KRH23409
KRH31520
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036
KRH65384
KRH70520
KRH76090
KRH76164

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63200.1	KRG97393	AT1G27300.1	21798944
AT3G63200.1	KRH31520	AT1G27300.1	21798944
AT3G63200.1	KRH76090	AT1G27300.1	21798944
AT3G63200.1	KRH01581	AT2G39450.1	21798944
AT3G63200.1	KRH70520	AT2G39450.1	21798944
AT3G63200.1	KRH09922	AT3G16310.1	21798944
AT3G63200.1	KRH23409	AT3G16310.1	21798944
AT3G63200.1	KRH65384	AT3G60600.1	21798944
AT3G63200.1	KRH76164	AT3G60600.1	21798944
AT3G63200.1	KRH11076	AT4G19030.1	21798944
AT3G63200.1	KRH21197	AT4G19030.1	21798944
AT3G63200.1	KRH42923	AT4G19030.1	21798944
AT3G63200.1	KRH42926	AT4G19030.1	21798944
AT3G63200.1	KRH45251	AT4G19030.1	21798944
AT3G63200.1	KRH59035	AT4G19030.1	21798944
AT3G63200.1	KRH59036	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71425	Soybean	cytosol	95.53	95.78
KRG95536	Soybean	cytosol	74.21	73.82
VIT_07s0151g01130.t01	Wine grape	cytosol	73.95	72.99
CDY56455	Canola	cytosol	70.0	72.68
KRH67210	Soybean	cytosol	75.26	71.5
Bra007735.1-P	Field mustard	cytosol	72.11	71.17
CDX76689	Canola	cytosol	72.11	71.17
CDX89181	Canola	cytosol	72.37	71.06
Bra040428.1-P	Field mustard	cytosol	72.37	71.06
AT3G63200.1	Thale cress	cytosol	71.32	70.57
CDX93922	Canola	cytosol	71.84	70.54
PGSC0003DMT400033524	Potato	cytosol	69.21	69.39
Solyc09g065240.2.1	Tomato	cytosol	69.21	68.67
PGSC0003DMT400051868	Potato	cytosol	68.42	68.06
KRH36757	Soybean	cytosol	42.63	37.33
KRH34879	Soybean	cytosol	45.26	37.15
KRH11757	Soybean	cytosol	41.05	36.11
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	45.53	31.8
KRH61261	Soybean	cytosol, peroxisome, plastid	15.53	26.22
KRH28482	Soybean	cytosol	23.95	22.58
KRH15336	Soybean	cytosol	24.21	22.55
KRH51959	Soybean	nucleus	24.21	22.22
KRH05707	Soybean	cytosol	23.68	22.0
KRH05709	Soybean	cytosol	23.16	21.57
KRH05706	Soybean	cytosol, extracellular, nucleus	21.32	21.54
KRH15338	Soybean	cytosol	22.63	21.08
KRH15334	Soybean	cytosol	22.63	21.08
KRH48827	Soybean	cytosol, plastid	12.63	20.17
KRH05708	Soybean	cytosol	19.74	19.89
KRH48829	Soybean	endoplasmic reticulum, extracellular	21.05	19.66
KRH48830	Soybean	extracellular, vacuole	21.32	19.38
KRH15337	Soybean	cytosol	7.63	17.58

Protein Annotations

EntrezGene:100777557	Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	EMBL:ACUP02006093	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:GLYMA_10G026800
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	UniProt:I1L840	InterPro:IPR002641	EnsemblPlants:KRH32021	ProteinID:KRH32021
ProteinID:KRH32021.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF5
SUPFAM:SSF52151	UniParc:UPI0001BA792D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:2346215..2347905

Molecular Weight (calculated)

41483.4 Da

IEP (calculated)

7.948

GRAVY (calculated)

-0.212

Length

380 amino acids

Sequence
(BLAST)

001: MEFSNLTLEI FSKLEQKWLS HCKATNKTRI LSIDGGGTTA IVAGEALIYL EDQIRVHTSD PHAQVADFFD IVAGTGIGAI LAAMITAGDA FGRPLYTARE
101: AVRLVSERNS ELYKLKSGGI FRRRRRFSSR SMDNALKQVF QRKEEDGRLL TLKDTCKPLL IPCFDLKSSA PFVFSRADAS ESPSFDFELW KVCRATSATP
201: SHFKPFDFAS VDGKTSCSAV DGGLVMNNPT AAAVTHVLHN KRDFPSVNGV EDLLVLSLGN GSSNAKACET RTCSTPSVVD IVLDGVSETI DQMLGNAFCW
301: NRTDYVRIQA FGLESEAMKK EEVLKERGLE SLPFGGKRLL TETNGNRIDS FVQRLVATGK PSPPSSPCKD SAVNPLANGR

Best Arabidopsis Sequence Match ( AT3G63200.1 )
(BLAST)

001: MEMDLSKVTL DIFTKLEQKW LSHCDSSRKT RILSIDGGGT TGIVAAASIL HLEHQIRLQT GDPHAHISDF FDIVAGTGIG GILAALLVAD DGSGRPMFTA
101: RDAVKFVAEK NSELFEIRYT GVFRRNKRYS GKSMERVLET AFRREDGKVL TMKDTCKPLL VPCYDLKTSA PFVFSRAGAS ESPSFDFELW KVCRATSATP
201: SLFKPFSVVS VDGKTSCSAV DGGLVMNNPT AAAVTHVLHN KRDFPSVNGV DDLLVLSLGN GPSTMSSSPG RKLRRNGDYS TSSVVDIVVD GVSDTVDQML
301: GNAFCWNRTD YVRIQANGLT SGGAEELLKE RGVETAPFGV KRILTESNGE RIEGFVQRLV ASGKSSLPPS PCKESAVNPL ADGR

Arabidopsis Description

PLP9Probable inactive patatin-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.