CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97393
KRH01581
KRH09922
KRH11076
KRH21197
KRH23409
KRH31520
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036
KRH65384
KRH70520
KRH76090
KRH76164

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63200.1	KRG97393	AT1G27300.1	21798944
AT3G63200.1	KRH31520	AT1G27300.1	21798944
AT3G63200.1	KRH76090	AT1G27300.1	21798944
AT3G63200.1	KRH01581	AT2G39450.1	21798944
AT3G63200.1	KRH70520	AT2G39450.1	21798944
AT3G63200.1	KRH09922	AT3G16310.1	21798944
AT3G63200.1	KRH23409	AT3G16310.1	21798944
AT3G63200.1	KRH65384	AT3G60600.1	21798944
AT3G63200.1	KRH76164	AT3G60600.1	21798944
AT3G63200.1	KRH11076	AT4G19030.1	21798944
AT3G63200.1	KRH21197	AT4G19030.1	21798944
AT3G63200.1	KRH42923	AT4G19030.1	21798944
AT3G63200.1	KRH42926	AT4G19030.1	21798944
AT3G63200.1	KRH45251	AT4G19030.1	21798944
AT3G63200.1	KRH59035	AT4G19030.1	21798944
AT3G63200.1	KRH59036	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95536	Soybean	cytosol	87.25	91.36
KRH32021	Soybean	cytosol	71.5	75.26
KRH71425	Soybean	cytosol	69.75	73.61
VIT_07s0151g01130.t01	Wine grape	cytosol	67.5	70.13
CDY56455	Canola	cytosol	63.75	69.67
Bra040428.1-P	Field mustard	cytosol	66.25	68.48
CDX89181	Canola	cytosol	66.25	68.48
Bra007735.1-P	Field mustard	cytosol	65.75	68.31
CDX76689	Canola	cytosol	65.75	68.31
CDX93922	Canola	cytosol	66.0	68.22
AT3G63200.1	Thale cress	cytosol	64.75	67.45
PGSC0003DMT400033524	Potato	cytosol	62.25	65.7
Solyc09g065240.2.1	Tomato	cytosol	62.5	65.27
PGSC0003DMT400051868	Potato	cytosol	62.25	65.18
KRH36757	Soybean	cytosol	39.75	36.64
KRH11757	Soybean	cytosol	38.75	35.88
KRH34879	Soybean	cytosol	40.75	35.21
KRG91895	Soybean	cytosol, extracellular, mitochondrion, plastid	41.5	30.51
KRH61261	Soybean	cytosol, peroxisome, plastid	14.75	26.22
KRH15336	Soybean	cytosol	23.0	22.55
KRH05707	Soybean	cytosol	22.5	22.0
KRH51959	Soybean	nucleus	22.75	21.98
KRH28482	Soybean	cytosol	22.0	21.84
KRH15338	Soybean	cytosol	21.75	21.32
KRH05709	Soybean	cytosol	21.75	21.32
KRH05706	Soybean	cytosol, extracellular, nucleus	20.0	21.28
KRH15334	Soybean	cytosol	21.5	21.08
KRH05708	Soybean	cytosol	19.5	20.69
KRH48827	Soybean	cytosol, plastid	12.0	20.17
KRH48830	Soybean	extracellular, vacuole	20.75	19.86
KRH48829	Soybean	endoplasmic reticulum, extracellular	18.75	18.43
KRH15337	Soybean	cytosol	7.5	18.18

Protein Annotations

EntrezGene:100806989	Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	UniProt:A0A0R0KJU3	EMBL:ACUP02002046	InterPro:Acyl_Trfase/lysoPLipase
EnsemblPlantsGene:GLYMA_03G154200	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	EnsemblPlants:KRH67210	ProteinID:KRH67210
ProteinID:KRH67210.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF5
SUPFAM:SSF52151	UniParc:UPI0003DEB320	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:36924537..36926123

Molecular Weight (calculated)

44052.8 Da

IEP (calculated)

8.477

GRAVY (calculated)

-0.214

Length

400 amino acids

Sequence
(BLAST)

001: MQHYNYPIPK HTFHFLSLLL THSSKLNTME LSKLTLEIFS KLEQQWLSHY EASTKTRILS IDGGGTTAIV AGASLVHLED QIRAQTSDPH AQITDYFDII
101: AGTGIGAILA VMITADDGFG RPLYTVRDAV NFLAENNREL YKPKRAGVFR RRRRFSARSM ENTLKRVFKR KEGEERLLTL KDTCKPLLVP CFDLKSSAPF
201: VFSRADASES PSFNFELWKA CRATSATPGV FAPFHFSSVD GKTSCAAVDG GLVMNNPAAA AVTHVLHNKR DFPSVNGVED LLVLSIGNGA PAKRMNNAGE
301: CSTSMLIDIA LDGVSETVDQ MLGNAFCWNR TDYVRIQAIG LGDQGKDDEK VLNERVLESL PFGGKRLLQE TNGNRIESFV QRLVATGKTS LPPSPCKLPP

Best Arabidopsis Sequence Match ( AT3G63200.1 )
(BLAST)

001: MEMDLSKVTL DIFTKLEQKW LSHCDSSRKT RILSIDGGGT TGIVAAASIL HLEHQIRLQT GDPHAHISDF FDIVAGTGIG GILAALLVAD DGSGRPMFTA
101: RDAVKFVAEK NSELFEIRYT GVFRRNKRYS GKSMERVLET AFRREDGKVL TMKDTCKPLL VPCYDLKTSA PFVFSRAGAS ESPSFDFELW KVCRATSATP
201: SLFKPFSVVS VDGKTSCSAV DGGLVMNNPT AAAVTHVLHN KRDFPSVNGV DDLLVLSLGN GPSTMSSSPG RKLRRNGDYS TSSVVDIVVD GVSDTVDQML
301: GNAFCWNRTD YVRIQANGLT SGGAEELLKE RGVETAPFGV KRILTESNGE RIEGFVQRLV ASGKSSLPPS PCKESAVNPL ADGR

Arabidopsis Description

PLP9Probable inactive patatin-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.