Factsheet for Bra017798.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 2
mitochondrion 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011730.1-P	Field mustard	cytosol	86.03	86.03
Bra011731.1-P	Field mustard	cytosol, peroxisome, plastid	82.11	82.72
AT4G37070.2	Thale cress	cytosol, peroxisome, plastid	83.33	82.13
AT4G37060.2	Thale cress	cytosol, golgi, plastid	79.41	72.81
Bra017799.1-P	Field mustard	cytosol	59.07	58.5
KRH28482	Soybean	cytosol	57.6	58.31
VIT_07s0031g00860.t01	Wine grape	cytosol	58.09	58.09
VIT_07s0031g00870.t01	Wine grape	cytosol	56.37	56.51
PGSC0003DMT400040781	Potato	cytosol	55.15	56.39
CDY42719	Canola	cytosol	98.28	56.32
Solyc02g090630.2.1	Tomato	cytosol	53.68	55.44
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	53.92	54.73
Bra011732.1-P	Field mustard	cytosol	50.74	54.19
Bra000578.1-P	Field mustard	cytosol	50.98	51.36
GSMUA_Achr3P06850_001	Banana	cytosol	50.98	50.98
Bra040428.1-P	Field mustard	cytosol	23.04	24.29
Bra007735.1-P	Field mustard	cytosol	22.3	23.64
Bra000125.1-P	Field mustard	cytosol	27.94	23.6
Bra005058.1-P	Field mustard	cytosol	27.94	23.41
Bra003202.1-P	Field mustard	mitochondrion	26.23	22.48
Bra007119.1-P	Field mustard	mitochondrion	26.72	21.98

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	EnsemblPlantsGene:Bra017798	EnsemblPlants:Bra017798.1	EnsemblPlants:Bra017798.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	UniProt:M4DMR3	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	UniParc:UPI0002540CD0	SEG:seg

Description

AT4G37070 (E=1e-194) PLP1, PLA IVA | patatin, putative

Coordinates

chrA03:+:30542362..30545459

Molecular Weight (calculated)

44658.7 Da

IEP (calculated)

6.720

GRAVY (calculated)

-0.223

Length

408 amino acids

Sequence
(BLAST)

001: MANDSSCKRN KPPSCGSLVT ILSLDGGGIR GTISGVILAC LEKQLQEIDG EDVRLADYFD VVAGTSTGGL ITAMLTVPDA SGRPHFAAKD IVPFYLEHCP
101: KIFPQPEGLA ALLPKLPKLL SGPKYDGKYL RNLLSNLLGE TKLHQTITNV VIPTFDMKKL QPAIFSSYQA LFDPSLDVKL SDICIGTSAA PTFFPPHYLS
201: NVDSQGKTSE FHLVDGGVTA SNPTLVAMTA VTKQIVKNNP DMGKLKPLGY DKFLVISIGT GSTKKVEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHFHSSVL FKALQSEDKY LRIDDDTLDN DAGSTDLATK SNLENLVKIG EKVLKNRVVH MNIDTGAYEP IPENVTNEEE LKRFAKILSE ERKLRRMSSD
401: TMTKDPTN

Best Arabidopsis Sequence Match ( AT4G37070.2 )
(BLAST)

001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK

Arabidopsis Description

PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.