Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- plastid 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_07s0031g00860.t01 | Wine grape | cytosol | 77.15 | 76.96 |
VIT_07s0031g00850.t01 | Wine grape | cytosol, peroxisome, plastid | 70.76 | 71.64 |
Solyc02g090630.2.1 | Tomato | cytosol | 63.88 | 65.82 |
VIT_18s0001g10880.t01 | Wine grape | cytosol | 65.6 | 65.76 |
PGSC0003DMT400040781 | Potato | cytosol | 63.39 | 64.66 |
VIT_18s0001g11010.t01 | Wine grape | cytosol | 64.13 | 64.29 |
KRH28482 | Soybean | cytosol | 63.39 | 64.02 |
VIT_18s0001g10980.t01 | Wine grape | cytosol, peroxisome, plastid | 61.18 | 63.68 |
VIT_18s0001g10940.t01 | Wine grape | cytosol, peroxisome, plastid | 63.15 | 63.3 |
VIT_18s0001g10950.t01 | Wine grape | cytosol, peroxisome, plastid | 62.41 | 62.56 |
VIT_18s0001g10970.t01 | Wine grape | cytosol, peroxisome, plastid | 62.16 | 62.32 |
VIT_18s0001g10850.t01 | Wine grape | cytosol | 62.65 | 61.74 |
VIT_18s0001g10910.t01 | Wine grape | cytosol | 62.41 | 61.5 |
VIT_18s0001g10870.t01 | Wine grape | cytosol | 62.16 | 61.26 |
VIT_18s0001g10920.t01 | Wine grape | extracellular | 63.88 | 59.63 |
CDX72620 | Canola | cytosol | 59.95 | 59.22 |
VIT_00s0567g00050.t01 | Wine grape | cytosol | 30.96 | 59.15 |
Bra017799.1-P | Field mustard | cytosol | 59.71 | 58.98 |
CDX75621 | Canola | cytosol | 58.48 | 58.48 |
CDX69271 | Canola | cytosol | 58.23 | 58.23 |
VIT_00s0567g00060.t01 | Wine grape | cytosol | 52.83 | 57.49 |
Bra011732.1-P | Field mustard | cytosol | 53.81 | 57.33 |
VIT_18s0001g10930.t01 | Wine grape | cytosol | 43.98 | 57.19 |
CDX72619 | Canola | cytosol | 57.25 | 57.11 |
CDY42720 | Canola | cytosol | 57.74 | 56.9 |
AT4G37050.1 | Thale cress | cytosol | 59.46 | 56.54 |
Bra017798.1-P | Field mustard | cytosol | 56.51 | 56.37 |
VIT_18s0001g10900.t01 | Wine grape | cytosol | 27.76 | 56.22 |
CDX75619 | Canola | cytosol | 56.02 | 55.88 |
Bra011730.1-P | Field mustard | cytosol | 56.02 | 55.88 |
Bra011731.1-P | Field mustard | cytosol, peroxisome, plastid | 55.53 | 55.8 |
CDX69270 | Canola | cytosol, peroxisome, plastid | 55.53 | 55.8 |
CDX75620 | Canola | cytosol, peroxisome, plastid | 55.53 | 55.8 |
GSMUA_Achr3P06850_001 | Banana | cytosol | 55.53 | 55.39 |
VIT_18s0001g10830.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 62.41 | 55.22 |
AT4G37070.2 | Thale cress | cytosol, peroxisome, plastid | 55.77 | 54.83 |
CDX69269 | Canola | cytosol | 55.53 | 54.46 |
AT4G37060.2 | Thale cress | cytosol, golgi, plastid | 56.27 | 51.46 |
VIT_00s0567g00040.t01 | Wine grape | cytosol | 20.39 | 51.23 |
AT5G43590.2 | Thale cress | mitochondrion | 52.58 | 45.73 |
VIT_07s0005g01890.t01 | Wine grape | mitochondrion | 36.61 | 39.11 |
VIT_07s0005g01880.t01 | Wine grape | plastid | 36.36 | 38.95 |
VIT_07s0005g01860.t01 | Wine grape | cytosol | 36.12 | 38.68 |
VIT_07s0005g01840.t01 | Wine grape | cytosol, mitochondrion, plastid | 35.38 | 33.96 |
CDY42719 | Canola | cytosol | 56.76 | 32.44 |
VIT_13s0019g04200.t01 | Wine grape | cytosol | 29.98 | 26.64 |
VIT_10s0092g00150.t01 | Wine grape | cytosol | 25.55 | 24.36 |
VIT_07s0151g01130.t01 | Wine grape | cytosol | 22.85 | 24.16 |
Protein Annotations
EntrezGene:100249295 | wikigene:100249295 | Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | InterPro:Acyl_Trfase/lysoPLipase | ProteinID:CBI21445 |
ProteinID:CBI21445.3 | UniProt:D7SVZ6 | EMBL:FN595233 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004620 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0047372 |
InterPro:IPR002641 | EntrezGene:LOC100249295 | wikigene:LOC100249295 | PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 |
PANTHER:PTHR32176 | PANTHER:PTHR32176:SF6 | SUPFAM:SSF52151 | UniParc:UPI00015C9C85 | ArrayExpress:VIT_07s0031g00870 | EnsemblPlantsGene:VIT_07s0031g00870 |
EnsemblPlants:VIT_07s0031g00870.t01 | RefSeq:XP_002281798 | RefSeq:XP_002281798.1 | SEG:seg | : | : |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:D7SVZ6]
Coordinates
chr7:-:17010120..17012303
Molecular Weight (calculated)
44002.2 Da
IEP (calculated)
5.124
GRAVY (calculated)
-0.233
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGTSSSLQ IKPPSRGSLI TILSIDGGGV RGIISGIILA SLESELQKLD GEDARLSDYF DVIAGTSSGG LITTMLAAPN QNNRPLYAAS EIKPFLFEHS
101: PKIFPPRSGI IGSVVNFFKI LTGPKYDGKY LHSQINKLLG NTKLDQTLTN VVIPTFDIKN LQPTIFSSYQ MAATPSLDAK LSDICIGTSA APTYLPAYCF
201: VNQDDQGSTR EFNLIDGGLA ASNPTLVAIS EVTKQVTNKN PDFSPFKPID YGSLLVISVG SGSPKQEHKY NAKMAAKWGI LGWLYNNGST PLVDSFTQAS
301: ADMVDYHNAV VFQALGCQEN YLRIDEATLT GDLASTDIAT KKNMNELVKV GEELLKKPVS RVNLDTGEYE AIKNGGTNEE ALRRFAKLLS DERKLRESNA
401: QDGQDSN
101: PKIFPPRSGI IGSVVNFFKI LTGPKYDGKY LHSQINKLLG NTKLDQTLTN VVIPTFDIKN LQPTIFSSYQ MAATPSLDAK LSDICIGTSA APTYLPAYCF
201: VNQDDQGSTR EFNLIDGGLA ASNPTLVAIS EVTKQVTNKN PDFSPFKPID YGSLLVISVG SGSPKQEHKY NAKMAAKWGI LGWLYNNGST PLVDSFTQAS
301: ADMVDYHNAV VFQALGCQEN YLRIDEATLT GDLASTDIAT KKNMNELVKV GEELLKKPVS RVNLDTGEYE AIKNGGTNEE ALRRFAKLLS DERKLRESNA
401: QDGQDSN
001: MENKSPSKKN KPPSCGSLVT ILSLDGGGVR GIIAGVILAF LEKQLQELDG EEARLADYFD VIAGTSTGGL VTAMLTVPDE TGRPHFAAKD IVPFYLEHCP
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK
101: KIFPQPTGVL ALLPKLPKLL SGPKYSGKYL RNLLSKLLGE TRLHQTLTNI VIPTFDIKKL QPTIFSSYQL LVDPSLDVKV SDICIGTSAA PTFFPPHYFS
201: NEDSQGNKTE FNLVDGAVTA NNPTLVAMTA VSKQIVKNNP DMGKLKPLGF DRFLVISIGT GSTKREEKYS AKKAAKWGII SWLYDDGSTP ILDITMESSR
301: DMIHYHSSVV FKALQSEDKY LRIDDDTLEG DVSTMDLATK SNLENLQKIG EKMLTNRVMQ MNIDTGVYEP VAENITNDEQ LKRYAKILSD ERKLRRLRSD
401: TMIKDSSNES QEIK
Arabidopsis Description
PLP1Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.