Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plasma membrane 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0005g01890.t01 | Wine grape | mitochondrion | 93.95 | 93.7 |
| VIT_07s0005g01880.t01 | Wine grape | plastid | 62.37 | 62.37 |
| VIT_07s0005g01840.t01 | Wine grape | cytosol, mitochondrion, plastid | 64.74 | 58.02 |
| VIT_00s0567g00050.t01 | Wine grape | cytosol | 26.05 | 46.48 |
| VIT_18s0001g10930.t01 | Wine grape | cytosol | 35.26 | 42.81 |
| VIT_18s0001g10900.t01 | Wine grape | cytosol | 21.58 | 40.8 |
| VIT_18s0001g10850.t01 | Wine grape | cytosol | 43.68 | 40.19 |
| VIT_18s0001g10980.t01 | Wine grape | cytosol, peroxisome, plastid | 41.32 | 40.15 |
| VIT_18s0001g11010.t01 | Wine grape | cytosol | 42.11 | 39.41 |
| VIT_18s0001g10950.t01 | Wine grape | cytosol, peroxisome, plastid | 42.11 | 39.41 |
| VIT_18s0001g10880.t01 | Wine grape | cytosol | 42.11 | 39.41 |
| VIT_00s0567g00060.t01 | Wine grape | cytosol | 38.68 | 39.3 |
| VIT_18s0001g10970.t01 | Wine grape | cytosol, peroxisome, plastid | 41.84 | 39.16 |
| VIT_18s0001g10870.t01 | Wine grape | cytosol | 42.37 | 38.98 |
| VIT_18s0001g10910.t01 | Wine grape | cytosol | 42.37 | 38.98 |
| VIT_18s0001g10940.t01 | Wine grape | cytosol, peroxisome, plastid | 41.05 | 38.42 |
| VIT_07s0031g00860.t01 | Wine grape | cytosol | 40.53 | 37.75 |
| VIT_07s0031g00850.t01 | Wine grape | cytosol, peroxisome, plastid | 39.74 | 37.56 |
| VIT_07s0031g00870.t01 | Wine grape | cytosol | 38.68 | 36.12 |
| VIT_18s0001g10920.t01 | Wine grape | extracellular | 40.79 | 35.55 |
| VIT_18s0001g10830.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 42.37 | 35.0 |
| VIT_00s0567g00040.t01 | Wine grape | cytosol | 12.63 | 29.63 |
| VIT_13s0019g04200.t01 | Wine grape | cytosol | 28.68 | 23.8 |
| VIT_07s0151g01130.t01 | Wine grape | cytosol | 21.32 | 21.04 |
| VIT_10s0092g00150.t01 | Wine grape | cytosol | 22.63 | 20.14 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | InterPro:Acyl_Trfase/lysoPLipase | ProteinID:CBI36985 | ProteinID:CBI36985.3 | UniProt:D7U2L9 |
| EMBL:FN596502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004620 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0047372 | InterPro:IPR002641 | PFAM:PF01734 |
| InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32176 | PANTHER:PTHR32176:SF4 | SUPFAM:SSF52151 | UniParc:UPI000198398B |
| ArrayExpress:VIT_07s0005g01860 | EnsemblPlantsGene:VIT_07s0005g01860 | EnsemblPlants:VIT_07s0005g01860.t01 | : | : | : |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:D7U2L9]
Coordinates
chr7:+:4315424..4317686
Molecular Weight (calculated)
41794.0 Da
IEP (calculated)
5.445
GRAVY (calculated)
-0.156
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTQGSSPT TNRKVITILS IDGGGFRGII PAVILSALEA ELQRLDGPDA RIADYFDLIA GTSTGSIVTA FLTTPYPLPS ASNGSTTNRP CEAKDIQQFY
101: IEHGPEIFAK EEDPVQTSKS ESFLDGLKHL IVQGVEKVLE YKYRPSRLSE KVDEQLGKIR LADTLTNVLV PAYDIQHLKL VTFSSHQARK ADSSVKLRDV
201: VMSSAAAPVF FPSHNFEADG RMYNLVDGGV AANNPTLLAI QEADHIFGNR DYNYLILSLG TCSEEEHQNF IDLTGPLPWM IDLKRGTPPL ANVLFKTSAD
301: MVDAYTLFVL GVGGRISSQN FLRIQDNTLK PEQLTMDDAS KKNFESLIDI AQRLLEKPVS FPSLVIGLQP MTTNRKALMR
101: IEHGPEIFAK EEDPVQTSKS ESFLDGLKHL IVQGVEKVLE YKYRPSRLSE KVDEQLGKIR LADTLTNVLV PAYDIQHLKL VTFSSHQARK ADSSVKLRDV
201: VMSSAAAPVF FPSHNFEADG RMYNLVDGGV AANNPTLLAI QEADHIFGNR DYNYLILSLG TCSEEEHQNF IDLTGPLPWM IDLKRGTPPL ANVLFKTSAD
301: MVDAYTLFVL GVGGRISSQN FLRIQDNTLK PEQLTMDDAS KKNFESLIDI AQRLLEKPVS FPSLVIGLQP MTTNRKALMR
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.