Factsheet for VIT_00s0567g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
mitochondrion 2
cytosol 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61261	Soybean	cytosol, peroxisome, plastid	60.56	57.33
TraesCS1A01G407900.1	Wheat	cytosol	59.15	52.94
HORVU7Hr1G113030.2	Barley	plastid	63.85	52.11
Os08t0376500-00	Rice	plastid	62.91	51.54
TraesCS7D01G491300.1	Wheat	plastid	61.5	50.97
Os08t0477500-01	Rice	plasma membrane	61.97	49.07
HORVU2Hr1G037280.1	Barley	cytosol	57.28	47.29
VIT_18s0001g10930.t01	Wine grape	cytosol	61.5	41.85
VIT_00s0567g00060.t01	Wine grape	cytosol	73.24	41.71
Solyc02g065100.1.1	Tomato	endoplasmic reticulum, extracellular	70.42	36.5
Solyc02g090490.2.1	Tomato	extracellular	70.42	36.41
Solyc03g044710.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	68.08	35.37
PGSC0003DMT400025955	Potato	extracellular	68.08	35.19
HORVU7Hr1G006840.3	Barley	cytosol	47.89	35.17
TraesCS7D01G034300.1	Wheat	mitochondrion	65.73	33.9
TraesCS7A01G504400.1	Wheat	cytoskeleton, cytosol, peroxisome	63.85	33.66
VIT_18s0001g10900.t01	Wine grape	cytosol	31.46	33.33
Solyc02g065090.2.1	Tomato	nucleus	65.73	33.33
HORVU5Hr1G119810.5	Barley	cytosol	60.09	33.16
VIT_07s0031g00860.t01	Wine grape	cytosol	63.38	33.09
TraesCS4A01G450400.1	Wheat	mitochondrion	65.73	33.02
VIT_18s0001g10940.t01	Wine grape	cytosol, peroxisome, plastid	62.91	33.0
TraesCS5D01G528100.1	Wheat	cytosol	60.56	32.91
TraesCS5B01G529100.1	Wheat	cytosol	60.56	32.91
PGSC0003DMT400002019	Potato	golgi, vacuole	64.79	32.86
TraesCS4A01G449600.1	Wheat	mitochondrion	65.26	32.78
VIT_18s0001g10980.t01	Wine grape	cytosol, peroxisome, plastid	60.09	32.74
VIT_18s0001g10850.t01	Wine grape	cytosol	63.38	32.69
TraesCS1A01G407800.2	Wheat	cytosol	60.09	32.65
TraesCS7A01G038300.1	Wheat	mitochondrion	64.79	32.55
VIT_18s0001g11010.t01	Wine grape	cytosol	61.97	32.51
Os08t0477100-01	Rice	plastid	65.73	32.48
TraesCS7A01G504100.1	Wheat	plastid	64.32	32.46
TraesCS7B01G411200.1	Wheat	plastid	64.32	32.46
TraesCS7D01G491900.1	Wheat	plastid	64.32	32.46
VIT_18s0001g10910.t01	Wine grape	cytosol	62.91	32.45
VIT_18s0001g10870.t01	Wine grape	cytosol	62.91	32.45
VIT_18s0001g10950.t01	Wine grape	cytosol, peroxisome, plastid	61.5	32.27
TraesCS6B01G170200.1	Wheat	plastid	64.32	32.24
TraesCS7D01G491200.1	Wheat	mitochondrion, plastid	63.85	32.23
OQU80645	Sorghum	cytosol	60.56	32.17
TraesCS4A01G017400.1	Wheat	plastid	65.26	32.1
TraesCS4D01G285300.1	Wheat	plastid	65.26	32.1
TraesCS4B01G286600.1	Wheat	plastid	65.26	32.1
VIT_18s0001g10880.t01	Wine grape	cytosol	61.03	32.02
VIT_18s0001g10970.t01	Wine grape	cytosol, peroxisome, plastid	61.03	32.02
VIT_07s0031g00850.t01	Wine grape	cytosol, peroxisome, plastid	60.09	31.84
KXG25325	Sorghum	plastid	65.26	31.81
TraesCS7B01G411300.1	Wheat	mitochondrion	62.44	31.74
Os08t0476900-01	Rice	plastid	63.85	31.63
TraesCS7B01G411800.1	Wheat	plastid	63.38	31.54
HORVU4Hr1G075070.7	Barley	plastid	64.32	31.49
TraesCS5B01G529000.1	Wheat	cytosol	58.69	31.49
HORVU5Hr1G119820.1	Barley	plastid	58.69	31.49
Zm00001d031811_P001	Maize	plastid	64.32	31.42
Zm00001d031813_P001	Maize	extracellular	63.85	31.26
TraesCS5D01G528000.1	Wheat	cytosol, peroxisome, plastid	58.69	31.25
TraesCS7A01G504200.1	Wheat	mitochondrion	60.56	31.23
TraesCS3D01G033500.1	Wheat	plastid	63.38	31.18
TraesCS3D01G033200.1	Wheat	plastid	63.38	31.18
TraesCS7A01G504700.1	Wheat	plastid	61.5	31.04
EES15134	Sorghum	plastid	63.38	31.03
VIT_07s0031g00870.t01	Wine grape	cytosol	59.15	30.96
TraesCS3B01G036800.1	Wheat	plastid	62.91	30.88
TraesCS3A01G046500.1	Wheat	plastid	61.5	30.25
TraesCS2B01G185200.1	Wheat	cytosol	57.75	30.22
VIT_18s0001g10920.t01	Wine grape	extracellular	61.5	30.05
HORVU2Hr1G029000.2	Barley	cytosol	57.75	29.85
TraesCS4A01G345300.1	Wheat	cytosol	56.34	29.85
TraesCS3B01G036100.1	Wheat	cytosol	38.03	29.78
HORVU7Hr1G113080.1	Barley	cytosol	65.26	29.76
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	58.69	29.69
Zm00001d031815_P001	Maize	cytosol	61.03	29.61
TraesCS2A01G159600.1	Wheat	cytosol	56.34	29.56
TraesCS2D01G166800.1	Wheat	cytosol	56.34	29.56
VIT_18s0001g10830.t01	Wine grape	mitochondrion, plasma membrane, plastid	63.38	29.35
HORVU3Hr1G004220.4	Barley	cytosol, plastid	61.5	27.29
TraesCS6A01G142200.1	Wheat	cytosol	41.78	27.05
VIT_07s0005g01860.t01	Wine grape	cytosol	46.48	26.05
VIT_07s0005g01890.t01	Wine grape	mitochondrion	46.48	25.98
OQU80643	Sorghum	cytosol	59.15	25.61
VIT_07s0005g01880.t01	Wine grape	plastid	43.19	24.21
VIT_07s0005g01840.t01	Wine grape	cytosol, mitochondrion, plastid	44.13	22.17
TraesCS4A01G345400.1	Wheat	cytosol	22.07	21.96
PGSC0003DMT400002016	Potato	cytosol	25.35	20.93
HORVU6Hr1G027900.2	Barley	cytosol	32.39	20.12
TraesCS3B01G036500.1	Wheat	plastid	40.85	19.59
TraesCS3D01G033600.1	Wheat	mitochondrion, peroxisome	27.23	19.21
VIT_13s0019g04200.t01	Wine grape	cytosol	37.56	17.47
VIT_07s0151g01130.t01	Wine grape	cytosol	30.52	16.88
VIT_10s0092g00150.t01	Wine grape	cytosol	29.11	14.52
OQU83677	Sorghum	cytosol	20.19	12.91
PGSC0003DMT400058995	Potato	cytosol	0.47	0.62
VIT_00s0567g00040.t01	Wine grape	cytosol	0.47	0.62
Os08t0376550-00	Rice	cytosol	0.47	0.55

Protein Annotations

Gene3D:3.40.1090.10	MapMan:35.1	InterPro:Acyl_Trfase/lysoPLipase	ProteinID:CCB50157	ProteinID:CCB50157.1	UniProt:F6HD62
EMBL:FN595550	GO:GO:0003674	GO:GO:0003824	GO:GO:0004620	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0047372	InterPro:IPR002641	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF14	SUPFAM:SSF52151	UniParc:UPI00015CDF06
ArrayExpress:VIT_00s0567g00050	EnsemblPlantsGene:VIT_00s0567g00050	EnsemblPlants:VIT_00s0567g00050.t01	SEG:seg	:	:

Description

Patatin [Source:UniProtKB/TrEMBL;Acc:F6HD62]

Coordinates

chrUn:-:32007177..32008295

Molecular Weight (calculated)

22985.6 Da

IEP (calculated)

7.433

GRAVY (calculated)

-0.039

Length

213 amino acids

Sequence
(BLAST)

001: MVSSCTQGRM VTVLSIDGGG IRGIIPGTLL AFLESKLQEL DGANARIADY FDIIAGTSTG GLVTSMLTAP NKDNRPIYAA KDINNFYLEH CPKIFPQNST
101: NPNTSVSGAT GPKYDGKYLR SLTDELLGDL TLKQTLTNVV IPTFDIKLLQ PIIFSTKDAR TNVAKNARLS DICIGTSAAP TYLPAHYFET RDASGKTRSF
201: DLIDGGLQLI ILH

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.