Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000125.1-P | Field mustard | cytosol | 87.78 | 90.68 |
| CDY07662 | Canola | cytosol | 86.17 | 90.34 |
| CDY24974 | Canola | cytosol | 85.97 | 90.13 |
| CDY44633 | Canola | cytosol | 84.77 | 87.04 |
| CDX74862 | Canola | cytosol | 78.16 | 86.86 |
| Bra005058.1-P | Field mustard | cytosol | 84.17 | 86.24 |
| AT3G54950.1 | Thale cress | mitochondrion | 73.55 | 75.2 |
| KRH34879 | Soybean | cytosol | 65.33 | 70.41 |
| VIT_13s0019g04200.t01 | Wine grape | cytosol | 64.53 | 70.31 |
| Solyc05g056030.2.1 | Tomato | cytosol | 62.12 | 66.52 |
| PGSC0003DMT400060317 | Potato | cytosol | 61.92 | 66.31 |
| GSMUA_Achr2P12330_001 | Banana | cytosol | 49.1 | 61.25 |
| GSMUA_Achr5P03830_001 | Banana | cytosol | 52.91 | 60.83 |
| GSMUA_Achr5P18500_001 | Banana | cytosol | 46.89 | 60.31 |
| GSMUA_Achr8P18860_001 | Banana | cytosol | 39.88 | 59.94 |
| KRG91895 | Soybean | cytosol, extracellular, mitochondrion, plastid | 65.13 | 59.74 |
| GSMUA_Achr11P... | Banana | mitochondrion | 33.87 | 58.68 |
| AT4G29800.2 | Thale cress | cytosol | 58.32 | 55.32 |
| EER95163 | Sorghum | cytosol | 49.1 | 53.26 |
| Zm00001d028482_P001 | Maize | cytosol | 48.7 | 52.83 |
| TraesCS4B01G221000.1 | Wheat | cytosol | 47.7 | 51.74 |
| TraesCS4D01G221300.1 | Wheat | cytosol | 47.49 | 51.63 |
| Os03t0254400-01 | Rice | cytosol | 47.9 | 50.96 |
| TraesCS4A01G083200.1 | Wheat | cytosol | 47.09 | 50.87 |
| HORVU0Hr1G008670.3 | Barley | cytosol | 35.47 | 43.81 |
| AT3G63200.1 | Thale cress | cytosol | 33.67 | 43.75 |
| AT4G37050.1 | Thale cress | cytosol | 23.25 | 27.1 |
| AT4G37070.2 | Thale cress | cytosol, peroxisome, plastid | 22.24 | 26.81 |
| AT2G26560.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 21.64 | 26.54 |
| AT4G37060.2 | Thale cress | cytosol, golgi, plastid | 23.05 | 25.84 |
| AT5G43590.2 | Thale cress | mitochondrion | 20.44 | 21.79 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.4 | EntrezGene:818507 | ProteinID:AAC28986.1 | ProteinID:AEC09647.1 | ArrayExpress:AT2G39220 |
| EnsemblPlantsGene:AT2G39220 | RefSeq:AT2G39220 | TAIR:AT2G39220 | RefSeq:AT2G39220-TAIR-G | EnsemblPlants:AT2G39220.1 | TAIR:AT2G39220.1 |
| EMBL:AY062648 | InterPro:Acyl_Trfase/lysoPLipase | Unigene:At.27277 | EMBL:BT000763 | EMBL:BT008869 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006629 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0016042 | GO:GO:0016787 | InterPro:IPR002641 | RefSeq:NP_181455.1 | UniProt:O80959 |
| PFAM:PF01734 | Symbol:PLP6 | InterPro:PNPLA_dom | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51635 | PANTHER:PTHR32241 | PANTHER:PTHR32241:SF3 |
| SUPFAM:SSF52151 | UniParc:UPI00000AC68D | SEG:seg | : | : | : |
Description
PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
Coordinates
chr2:-:16374881..16377168
Molecular Weight (calculated)
54498.1 Da
IEP (calculated)
6.629
GRAVY (calculated)
-0.303
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.