Factsheet for Os12t0611300-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 1
vacuole 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	59.96	65.21
Zm00001d041481_P001	Maize	cytosol	56.32	64.76
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	59.77	64.46
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	59.2	63.98
OQU79585	Sorghum	cytosol	56.51	60.95
Os03t0640000-00	Rice	cytosol	50.77	60.09
HORVU5Hr1G011400.6	Barley	mitochondrion	49.04	57.14
Zm00001d031053_P001	Maize	plastid	55.17	51.52
GSMUA_Achr11P...	Banana	cytosol	24.71	46.07
Os03t0784100-00	Rice	cytosol	40.04	44.47
GSMUA_Achr8P07160_001	Banana	cytosol	31.42	43.39
GSMUA_Achr2P01360_001	Banana	cytosol	31.42	41.1
KRH36757	Soybean	cytosol	31.99	38.48
KRH11757	Soybean	cytosol	31.8	38.43
GSMUA_Achr5P26630_001	Banana	cytosol	24.71	37.39
VIT_10s0092g00150.t01	Wine grape	cytosol	29.89	36.53
PGSC0003DMT400060932	Potato	cytosol	29.69	36.13
PGSC0003DMT400021555	Potato	cytosol	30.08	36.09
Solyc10g080690.1.1	Tomato	cytosol	29.5	35.65
Solyc10g078530.1.1	Tomato	cytosol	29.69	35.63
Os06t0677000-00	Rice	plastid	32.18	34.93
Os03t0254400-01	Rice	cytosol	30.08	33.48
Os07t0144500-00	Rice	mitochondrion, plastid	23.56	29.57
Os08t0376500-00	Rice	plastid	13.98	28.08
Os08t0477500-01	Rice	plasma membrane	12.64	24.54
Os11t0614500-02	Rice	cytosol	10.34	22.04
Os08t0477100-01	Rice	plastid	17.82	21.58
Os03t0393900-01	Rice	mitochondrion	17.43	21.06
Os09t0462400-00	Rice	cytosol	13.6	20.76
Os08t0476900-01	Rice	plastid	17.05	20.7
Os11t0614400-01	Rice	plasma membrane	16.48	20.62
Os01t0898500-01	Rice	plastid	15.52	19.71
Os12t0552200-01	Rice	cytosol, nucleus, plastid	14.37	16.78
Os08t0376550-00	Rice	cytosol	5.36	15.47

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	UniProt:A0A0P0YC13	InterPro:Acyl_Trfase/lysoPLipase	ProteinID:BAT18040.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016042	GO:GO:0016301	GO:GO:0016740	GO:GO:0016787	GO:GO:0019538	InterPro:IPR002641
EnsemblPlantsGene:Os12g0611300	EnsemblPlants:Os12t0611300-00	InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4
SUPFAM:SSF52151	UniParc:UPI000393A264	SEG:seg	:	:	:

Description

Patatin-related phospholipase A III zetaSimilar to Patatin-like phospholipase family protein, expressed. (Os12t0611300-00)

Coordinates

chr12:-:25838652..25840421

Molecular Weight (calculated)

53004.8 Da

IEP (calculated)

9.944

GRAVY (calculated)

-0.061

Length

522 amino acids

Sequence
(BLAST)

001: MASPPTPQPP PPVDVDLGKL SYEIFSLLES NFLFGAGAGG GGGVCSLPGT PGRALLGGKV RVLAIDGCGP GPGDALLAAA ALVRLETALR EKSGDGDARV
101: ADFFDAAAGA GAGGVLAAML FLKGADGRPR YTAADALAFV AASLGKGGWR GGGGGGGGRR WWGVAALFRR GSSAERSSLR RVFGDAHAGT TVAPLLVPCY
201: DLATAAPFLF SRADAVESGS FDFRLRDVCA ATCAGGAAAT AVRSVDGRTA IAAASGGVAA MGNPTAAAIT HVLHNKQEFP LAAGVDDLLV VSIGSGSSSA
301: ATPSTAAGWR TPLPSRSPSP AEMVRLTAEG VADMVKKTHT HTQSQPSISN PTAPIEPRGV AGVQDEGAEL GGREEGGGDR RRDADAAERG GGAVPGAAAV
401: GEVKPGEAGR VRGGACEGAR AAAGLAGAPQ RGHQAGGRRR RRRDAGAPLV GDHHVVRHRH HRQDHRLQHA VAGGVAGLRP PLAAAAAIAG DVVRVEVLYI
501: CHPWTDRSRR WLFNFFFIYV FR

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.