Factsheet for GSMUA_Achr5P26630_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	58.55	72.14
GSMUA_Achr8P07160_001	Banana	cytosol	73.33	66.93
GSMUA_Achr2P01360_001	Banana	cytosol	69.28	59.9
GSMUA_AchrUn_...	Banana	cytosol	51.88	49.58
GSMUA_Achr5P02370_001	Banana	cytosol	52.17	45.8
TraesCS5D01G430400.1	Wheat	cytosol	51.01	44.78
TraesCS5B01G424100.1	Wheat	cytosol	50.14	44.02
TraesCS5A01G422200.1	Wheat	cytosol	49.57	42.86
TraesCS5A01G422000.1	Wheat	cytosol	53.04	41.5
TraesCS5B01G423900.1	Wheat	cytosol	53.33	41.44
Zm00001d034340_P001	Maize	cytosol	51.3	40.41
EER90785	Sorghum	cytosol	52.17	40.09
Zm00001d033254_P001	Maize	cytosol	48.99	39.39
KRH11757	Soybean	cytosol	49.28	39.35
VIT_10s0092g00150.t01	Wine grape	cytosol	48.7	39.34
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.99	38.94
Solyc10g078530.1.1	Tomato	cytosol	48.7	38.62
PGSC0003DMT400021555	Potato	cytosol	48.7	38.62
Os03t0784100-00	Rice	cytosol	52.46	38.51
GSMUA_Achr6P31310_001	Banana	cytosol	52.17	38.3
KRH36757	Soybean	cytosol	48.12	38.25
Zm00001d041481_P001	Maize	cytosol	50.14	38.11
TraesCS5D01G430300.1	Wheat	plastid	52.75	37.92
Zm00001d000203_P001	Maize	cytosol	48.7	37.75
EER91181	Sorghum	plastid	50.43	37.74
TraesCSU01G072800.1	Wheat	cytosol	48.12	37.73
TraesCS5D01G385900.1	Wheat	cytosol	48.41	37.7
HORVU5Hr1G103060.1	Barley	mitochondrion	51.88	37.68
Os03t0640000-00	Rice	cytosol	48.12	37.64
EER93762	Sorghum	plastid	48.12	37.3
Solyc10g080690.1.1	Tomato	cytosol	46.67	37.27
HORVU5Hr1G093250.4	Barley	cytosol	48.41	37.11
Zm00001d033256_P001	Maize	cytosol	47.25	36.79
PGSC0003DMT400060932	Potato	cytosol	45.51	36.6
HORVU5Hr1G011400.6	Barley	mitochondrion	47.25	36.38
OQU79585	Sorghum	cytosol	51.01	36.36
Zm00001d018788_P001	Maize	nucleus	47.83	35.41
GSMUA_Achr8P18860_001	Banana	cytosol	33.91	35.24
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	48.99	35.21
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	48.7	34.71
TraesCS5A01G047000.1	Wheat	cytosol, peroxisome, plastid	48.41	34.58
GSMUA_Achr2P12330_001	Banana	cytosol	40.0	34.5
TraesCS5B01G379300.1	Wheat	plastid	48.12	34.23
EER97967	Sorghum	nucleus	47.25	33.13
GSMUA_Achr5P03830_001	Banana	cytosol	40.0	31.8
GSMUA_Achr5P18500_001	Banana	cytosol	35.07	31.19
Zm00001d031053_P001	Maize	plastid	48.12	29.7
GSMUA_AchrUn_...	Banana	plastid	36.81	28.86
Os07t0144500-00	Rice	mitochondrion, plastid	34.78	28.85
GSMUA_Achr4P31750_001	Banana	cytosol	55.94	28.3
GSMUA_Achr11P...	Banana	mitochondrion	22.32	26.74
Os12t0611300-00	Rice	cytosol, peroxisome, plastid	37.39	24.71
GSMUA_Achr10P...	Banana	cytosol	22.61	19.4
GSMUA_Achr7P11810_001	Banana	cytosol	22.61	19.21
GSMUA_Achr11P...	Banana	cytosol	18.55	18.93
GSMUA_Achr3P06850_001	Banana	cytosol	21.74	18.38
GSMUA_Achr2P22340_001	Banana	cytosol	22.03	18.31
GSMUA_Achr7P18980_001	Banana	plastid	21.45	17.92
GSMUA_Achr6P02240_001	Banana	cytosol	20.87	17.43
GSMUA_Achr3P20370_001	Banana	cytosol	20.87	17.39
GSMUA_Achr7P12940_001	Banana	cytosol	23.48	17.02
GSMUA_Achr9P27010_001	Banana	cytosol	20.0	16.08

Protein Annotations

EnsemblPlants:GSMUA_Achr5P26630_001	EnsemblPlants:GSMUA_Achr5T26630_001	EnsemblPlantsGene:GSMUA_Achr5G26630_001	Gene3D:3.40.1090.10	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	PANTHER:PTHR32241	PANTHER:PTHR32241:SF6	SEG:seg	SUPFAM:SSF52151	UniParc:UPI000296D309
UniProt:M0T1Y8	MapMan:35.1	:	:	:	:

Description

PLA IIIA/PLP7, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G26630_001]

Coordinates

chr5:+:27358154..27359856

Molecular Weight (calculated)

36141.9 Da

IEP (calculated)

5.498

GRAVY (calculated)

-0.014

Length

345 amino acids

Sequence
(BLAST)

001: MSAAAAWMEP RLEVDKLSYE IFSMLESEFL YDDHKLLLRS TPAAPAASCA VASRVRVLSV DAAEGVITGA TLARLEASLR KQSGDPDACV ADFFDLAAGS
101: GSGGGILGGL LCRSGGLLRR VFGNTTLRDT LKPADGYDFR MEEVCAATCA GPTAVEVRSV DGRTMIRAVG GRLAMGNPTA AAVTHVLNNR HEFPTAGGVE
201: DLLVVSIGGA EAPAPHGKAR ALLSEAELVR IASSVHADVV DQAVATAFGE CRATNYVRIE GNGAVPGTTT AAAAGEGMLR ERGVESVLFR ERKLSERTNE
301: EKLNLFAAEL IKEQERRKQS TVPAVALKTS VTPFESSSSS TATSA

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.