Factsheet for GSMUA_Achr6P31310_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	53.4	69.53
GSMUA_Achr5P02370_001	Banana	cytosol	53.19	63.61
GSMUA_Achr8P07160_001	Banana	cytosol	45.96	57.14
GSMUA_Achr11P...	Banana	cytosol	34.04	57.14
GSMUA_Achr5P26630_001	Banana	cytosol	38.3	52.17
GSMUA_Achr2P01360_001	Banana	cytosol	42.55	50.13
KRH11757	Soybean	cytosol	42.55	46.3
VIT_10s0092g00150.t01	Wine grape	cytosol	41.7	45.9
KRH36757	Soybean	cytosol	42.34	45.85
PGSC0003DMT400021555	Potato	cytosol	40.85	44.14
Solyc10g078530.1.1	Tomato	cytosol	40.85	44.14
PGSC0003DMT400060932	Potato	cytosol	39.15	42.89
Solyc10g080690.1.1	Tomato	cytosol	39.36	42.82
GSMUA_Achr5P18500_001	Banana	cytosol	32.77	39.69
GSMUA_Achr8P18860_001	Banana	cytosol	27.87	39.46
GSMUA_Achr5P03830_001	Banana	cytosol	36.17	39.17
GSMUA_AchrUn_...	Banana	plastid	36.38	38.86
GSMUA_Achr2P12330_001	Banana	cytosol	32.77	38.5
GSMUA_Achr4P31750_001	Banana	cytosol	52.13	35.92
GSMUA_Achr11P...	Banana	mitochondrion	21.7	35.42
GSMUA_Achr10P...	Banana	cytosol	18.51	21.64
GSMUA_Achr7P11810_001	Banana	cytosol	17.66	20.44
GSMUA_Achr2P22340_001	Banana	cytosol	17.66	20.0
GSMUA_Achr6P02240_001	Banana	cytosol	17.02	19.37
GSMUA_Achr3P06850_001	Banana	cytosol	16.81	19.36
GSMUA_Achr11P...	Banana	cytosol	13.83	19.23
GSMUA_Achr7P18980_001	Banana	plastid	15.96	18.16
GSMUA_Achr3P20370_001	Banana	cytosol	15.74	17.87
GSMUA_Achr7P12940_001	Banana	cytosol	17.87	17.65
GSMUA_Achr9P27010_001	Banana	cytosol	15.74	17.25

Protein Annotations

EnsemblPlants:GSMUA_Achr6P31310_001	EnsemblPlants:GSMUA_Achr6T31310_001	EnsemblPlantsGene:GSMUA_Achr6G31310_001	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32241	PANTHER:PTHR32241:SF6
PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	UniParc:UPI00029650A5	UniProt:M0TBS6	MapMan:5.7.2.2.4

Description

PLA IIIA/PLP7, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G31310_001]

Coordinates

chr6:+:31162227..31166247

Molecular Weight (calculated)

50344.7 Da

IEP (calculated)

8.423

GRAVY (calculated)

0.068

Length

470 amino acids

Sequence
(BLAST)

001: MAFVDSDKLS YEIFSILESK FLFGLDDHNK LLFPSSSSPS STDSPRTPAG AAGRVRILSI DGGGSPSDAF LAAAALARLE SSLRRHSGDP SATVTEMFDV
101: AAGSGAGGRG FLRGVFRRPG GFLRRIFGDA TLRDTIKPLL IPCYDLATGA PFLFSRADAV EADGYDFRVW EVCAATCADA GAAAVELRSV DGRTRVAAAG
201: GGVAMANPAA AAMTHVLHNK QEFPFVAGVE DLMVVSLAAS AVAPSAAGTA GLVRIAGEGV ADMVDQAVAM AFGDCRRSNY VRIQANGFMC GNCTPRMANP
301: KNLMEAAEDI MSQRNVESLL FRGKKVSGET NAEKLDRFSG ALIKEEERRK KSPIPTVVST LVSKIPQLTP PRVKQTYLCD PMDRRICAVL LLPILLSQGD
401: KSVMESLHAY TSYWYRVFFS VSVKYCCMFT IYKKAPLQSC LSMAVDLLIK ACLVNCSTCN AHSSTRFSNK

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.