Factsheet for GSMUA_Achr4P31750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02370_001	Banana	cytosol	39.44	68.45
GSMUA_AchrUn_...	Banana	cytosol	34.16	64.54
GSMUA_Achr11P...	Banana	cytosol	24.93	60.71
GSMUA_Achr8P07160_001	Banana	cytosol	31.52	56.88
GSMUA_Achr5P26630_001	Banana	cytosol	28.3	55.94
GSMUA_Achr6P31310_001	Banana	cytosol	35.92	52.13
KRH36757	Soybean	cytosol	31.96	50.23
GSMUA_Achr2P01360_001	Banana	cytosol	29.18	49.87
KRH11757	Soybean	cytosol	31.52	49.77
VIT_10s0092g00150.t01	Wine grape	cytosol	30.94	49.41
PGSC0003DMT400060932	Potato	cytosol	30.5	48.48
Solyc10g080690.1.1	Tomato	cytosol	30.35	47.92
Solyc10g078530.1.1	Tomato	cytosol	29.91	46.9
PGSC0003DMT400021555	Potato	cytosol	29.77	46.67
GSMUA_Achr2P12330_001	Banana	cytosol	25.37	43.25
GSMUA_Achr8P18860_001	Banana	cytosol	20.97	43.07
GSMUA_AchrUn_...	Banana	plastid	25.51	39.55
GSMUA_Achr5P03830_001	Banana	cytosol	25.07	39.4
GSMUA_Achr5P18500_001	Banana	cytosol	22.29	39.18
GSMUA_Achr11P...	Banana	mitochondrion	13.34	31.6
GSMUA_Achr10P...	Banana	cytosol	14.37	24.38
GSMUA_Achr7P11810_001	Banana	cytosol	14.37	24.14
GSMUA_Achr2P22340_001	Banana	cytosol	14.52	23.86
GSMUA_Achr11P...	Banana	cytosol	11.14	22.49
GSMUA_Achr7P12940_001	Banana	cytosol	15.1	21.64
GSMUA_Achr9P27010_001	Banana	cytosol	13.49	21.45
GSMUA_Achr3P06850_001	Banana	cytosol	12.76	21.32
GSMUA_Achr7P18980_001	Banana	plastid	12.32	20.34
GSMUA_Achr6P02240_001	Banana	cytosol	12.32	20.34
GSMUA_Achr3P20370_001	Banana	cytosol	12.02	19.81

Protein Annotations

MapMan:22.5.4.3.3	Gene3D:3.40.1090.10	InterPro:Acyl_Trfase/lysoPLipase	ncoils:Coil	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0006810	GO:GO:0007034	GO:GO:0008150	GO:GO:0008152
EnsemblPlantsGene:GSMUA_Achr4G31750_001	EnsemblPlants:GSMUA_Achr4P31750_001	EnsemblPlants:GSMUA_Achr4T31750_001	InterPro:IPR002641	UniProt:M0STT7	PFAM:PF03357
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF6	SUPFAM:SSF52151	InterPro:Snf7_fam
UniParc:UPI0002967C01	SEG:seg	:	:	:	:

Description

PLA IIIA/PLP7, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G31750_001]

Coordinates

chr4:+:28822854..28832466

Molecular Weight (calculated)

73415.6 Da

IEP (calculated)

8.287

GRAVY (calculated)

-0.271

Length

682 amino acids

Sequence
(BLAST)

001: MAFAPALVEP SVDVDKLSYE IFSILESKFL FGIDDPKLLL SSSSSSASPA DAPVPRPAAP GGKVRILSID GGGRSSDALL AAASLARLES SLRSRSGDPS
101: ARVADFFDVA AGSGAGGVLA ALLFTRGPDG RPLLAADEAL RFLLERSGRS FVPVRRGPLG WLLHWRPGAA LRRVFGDATL RDTADGFDFR IREVCAATCA
201: DPAAGAAPVE MRSADGRTRI AAVGGGVAMG NPAAAAITHV LNNKQEFPFA AGVEDLMVLS LGSTVGCVGP EGGAGRRRLV PSPSELVRIA GEVVADMVDQ
301: AIAMAFGHHR TNNYVRIQVN GYESSNYASK INNVIKSLSS LEEKLSERNI ESMLFRGKKF SEQTNIEKLE WFAGELIKEE EKRKKSQIPI VVLKQVMTPR
401: TSSTTTSTII TTTTTITTSP SPLAASTHPD LGVLASLVRG FLFSFPTISL LGRREAHHEH LQEEDLSQGC SQDEQKGNGS RHKGCGTRDR FAAVRGEKTG
501: CRDQEDCTNW ERGKLFSAAT RILARQLVRL RQQITNLQGT RAQIRGIATH TQAMYANTSL STGMKGASKA MAAMNKQMEP AKQAKVMKEF QKQSSQMDMT
601: LEMMSEAIDE TLDKDEAEEE TEELTNQVLD EIGVDVASQL SSAPKGRIAV SSKKVDTASR TVAPKNPEVD DLEKRLASLR RI

Best Arabidopsis Sequence Match ( AT5G44560.2 )
(BLAST)

001: MAVATRGIER EITSLQLEEK RLVAEIKKTA KTGNEAATKI LARQLVRLRQ QITNLQGSRA QIRGVTTHTQ ALYASTSISS GMKGATKAMV AMNKQMAPTK
101: QAKVIKDFQK QSAQLDMTIE MMSEAIDETL DKDEAEEETE DLTNQVLDEI GVGVASQLSS APKGRIATKT AAPPASTAAT NKNSESSEVD ELEKRLASLR
201: RI

Arabidopsis Description

VPS2.2Vacuolar protein sorting-associated protein 2 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WTY4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.