CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 4
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033254_P001	Maize	cytosol	84.94	88.11
EER91181	Sorghum	plastid	88.99	85.9
Zm00001d000203_P001	Maize	cytosol	82.02	82.02
OQU91280	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.2	80.18
Os03t0640000-00	Rice	cytosol	76.4	77.1
TraesCS5D01G385900.1	Wheat	cytosol	76.4	76.75
TraesCSU01G072800.1	Wheat	cytosol	75.51	76.36
HORVU5Hr1G093250.4	Barley	cytosol	76.18	75.33
TraesCS5B01G379300.1	Wheat	plastid	75.73	69.48
OQU79585	Sorghum	cytosol	70.56	64.88
GSMUA_Achr8P07160_001	Banana	cytosol	43.6	51.32
EER90785	Sorghum	cytosol	50.79	50.33
GSMUA_Achr2P01360_001	Banana	cytosol	44.27	49.37
GSMUA_Achr11P...	Banana	cytosol	30.79	48.93
GSMUA_Achr5P26630_001	Banana	cytosol	37.3	48.12
KRH11757	Soybean	cytosol	44.94	46.3
KRH36757	Soybean	cytosol	44.72	45.85
VIT_10s0092g00150.t01	Wine grape	cytosol	42.92	44.73
PGSC0003DMT400021555	Potato	cytosol	41.8	42.76
EER95163	Sorghum	cytosol	44.04	42.61
Solyc10g080690.1.1	Tomato	cytosol	41.35	42.59
EER97967	Sorghum	nucleus	46.97	42.48
PGSC0003DMT400060932	Potato	cytosol	40.9	42.42
Solyc10g078530.1.1	Tomato	cytosol	41.35	42.3
EER90215	Sorghum	plastid	43.82	41.4
OQU84037	Sorghum	cytosol, extracellular, plastid	8.31	38.14
KXG25325	Sorghum	plastid	23.82	24.26
KXG35787	Sorghum	cytosol	20.67	23.41
OQU80645	Sorghum	cytosol	20.9	23.19
EER94748	Sorghum	mitochondrion	22.7	23.11
OQU88041	Sorghum	cytosol	21.35	23.0
EES08840	Sorghum	cytosol	20.45	22.47
EES15134	Sorghum	plastid	21.8	22.3
EES10106	Sorghum	plastid	20.0	21.71
EER99713	Sorghum	cytosol	19.55	21.59
EES08841	Sorghum	cytosol	20.0	21.55
EES10271	Sorghum	cytosol	15.51	19.6
OQU80643	Sorghum	cytosol	21.12	19.11
OQU83677	Sorghum	cytosol	9.89	13.21

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	EntrezGene:8062222	InterPro:Acyl_Trfase/lysoPLipase	UniProt:C5WR91	EnsemblPlants:EER93762
ProteinID:EER93762	ProteinID:EER93762.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0016042	GO:GO:0016787	InterPro:IPR002641	PFAM:PF01734
InterPro:PNPLA_dom	PFscan:PS51635	PANTHER:PTHR32241	PANTHER:PTHR32241:SF4	EnsemblPlantsGene:SORBI_3001G157900	SUPFAM:SSF52151
UniParc:UPI0001A82B79	RefSeq:XP_002466764.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:12796085..12797760

Molecular Weight (calculated)

45667.2 Da

IEP (calculated)

8.495

GRAVY (calculated)

0.015

Length

445 amino acids

Sequence
(BLAST)

001: MEAYAAPASP PTCVDKLSHQ LFSLLESRFL GGWCPSGPGT PARALLDGGR VRVLAIDGCG AGAEDALLAA AALARLEAKL RDCTGDPDAR VADFFDVAAG
101: AGAGAVLAAM LFLRGADGRP RYSAQDALAF VAASVGGNGK GWGGGRRGPR WAKLFRGARG GADDRMFRRV FGDATLRDTV APLLVPCYDL GTAAPFVFSR
201: ADAVESDSFD FRLRDVCAAT CAAGGALACV RSVDGATAIA GASGGVAAMG NPAAAAITHV LHNKQEFPLA TGVEDLLVLS IGAGTSATVV RDGSSTPMPT
301: RSPSPRELAR VTAEGVADMV DESVAMAFGH ACGSSYVRIQ ASKAPAAHEA AAAAAGAMML AQRNVESVLF RGRRLSERTN AEKVDALAAE LVKEQERRRH
401: SPLPNVAIKQ VGTPRLSSAT TASSGTGTAR TASTMPSPAS WESRR

Best Arabidopsis Sequence Match ( AT2G39220.1 )
(BLAST)

001: MLTTMQRVHN KPIDSIGGFK HLVKQSNGGD GGVTATDMQE PSIETDKLSY EIFSILESKF LFGYDDDLKL MESRSRDPSP EQETASPAMV EALNGVVPGT
101: VKNQRGKVCV LSIDSGGMRG IIPGKALAYL EHALKSKSGD PNARIADYFD VASGSGIGGI FTAMLFASSD GNRPIFKAED TWRFLAMKGK SFYNKSPPGI
201: LNRVMKTGSG GSGGSGSKLE KAMKESFEEL TLKDTLKPVL IPCYDLTSSA PFLFSRADAL ETDGYDFKLW EVCRATWAEP GVFEPVEMRS VDGKTRCVAV
301: DGGLAMSNPT AAAITHVLHN KQEFPFVRGV EDLLVLSLGT GQLVDVKYDC DKVMKWKAKH WARPAVRISA DGAADTVDQA VSMAFGQCRR SNYVRIQANG
401: SSFGPCKPNI DTDASPSNVN MLVGVAEEML KQKNAESVLF GGKKINEESN YEKLDWLAGE LVLEHQRRSC RIAPTVAFKQ SGDRRVDQQT IFKDIDCMF

Arabidopsis Description

PLP6Patatin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O80959]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.