Factsheet for Zm00001d034340_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90785	Sorghum	cytosol	88.58	86.41
TraesCS5D01G430400.1	Wheat	cytosol	67.12	74.81
TraesCS5B01G424100.1	Wheat	cytosol	67.12	74.81
TraesCS5A01G422200.1	Wheat	cytosol	66.89	73.43
TraesCS5A01G422000.1	Wheat	cytosol	72.37	71.88
TraesCS5B01G423900.1	Wheat	cytosol	72.6	71.62
Os03t0784100-00	Rice	cytosol	74.2	69.15
HORVU5Hr1G103060.1	Barley	mitochondrion	73.29	67.58
TraesCS5D01G430300.1	Wheat	plastid	72.15	65.83
GSMUA_Achr8P07160_001	Banana	cytosol	49.54	57.41
GSMUA_Achr11P...	Banana	cytosol	36.3	56.79
Zm00001d018788_P001	Maize	nucleus	56.85	53.43
Zm00001d033254_P001	Maize	cytosol	50.91	51.98
Zm00001d041481_P001	Maize	cytosol	53.42	51.54
GSMUA_Achr2P01360_001	Banana	cytosol	46.8	51.38
GSMUA_Achr5P26630_001	Banana	cytosol	40.41	51.3
KRH11757	Soybean	cytosol	49.32	50.0
Zm00001d000203_P001	Maize	cytosol	50.68	49.89
Zm00001d033256_P001	Maize	cytosol	50.0	49.44
KRH36757	Soybean	cytosol	47.72	48.16
VIT_10s0092g00150.t01	Wine grape	cytosol	46.8	48.01
Zm00001d014386_P001	Maize	cytosol, plastid	43.61	46.81
PGSC0003DMT400060932	Potato	cytosol	45.66	46.62
Solyc10g080690.1.1	Tomato	cytosol	45.89	46.53
PGSC0003DMT400021555	Potato	cytosol	45.89	46.21
Solyc10g078530.1.1	Tomato	cytosol	45.43	45.75
Zm00001d028482_P001	Maize	cytosol	45.21	43.04
Zm00001d031053_P001	Maize	plastid	52.28	40.97
Zm00001d005911_P001	Maize	cytosol	24.43	26.62
Zm00001d029412_P001	Maize	mitochondrion	24.43	25.0
Zm00001d031813_P001	Maize	extracellular	24.66	24.83
Zm00001d031815_P001	Maize	cytosol	24.2	24.15
Zm00001d048841_P001	Maize	mitochondrion, plasma membrane	22.15	23.66
Zm00001d031811_P001	Maize	plastid	23.52	23.62
Zm00001d007620_P001	Maize	cytosol, peroxisome, plastid	21.69	23.34
Zm00001d007616_P001	Maize	cytosol, peroxisome, plastid	21.69	23.34
Zm00001d007604_P001	Maize	cytosol, peroxisome, plastid	21.69	23.34
Zm00001d042041_P001	Maize	cytosol	20.09	23.22
Zm00001d007618_P001	Maize	mitochondrion	21.46	23.1
Zm00001d007623_P002	Maize	mitochondrion	21.69	22.73
Zm00001d031814_P001	Maize	cytosol, plasma membrane, plastid	21.0	21.85
Zm00001d042504_P002	Maize	cytosol	20.55	21.38
Zm00001d052923_P001	Maize	endoplasmic reticulum, extracellular	23.06	19.84

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.4	UniProt:A0A1D6L6Q9	InterPro:Acyl_Trfase/lysoPLipase	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016042
GO:GO:0016787	InterPro:IPR002641	ProteinID:ONM09983.1	PFAM:PF01734	InterPro:PNPLA_dom	PFscan:PS51635
PANTHER:PTHR32241	PANTHER:PTHR32241:SF6	SUPFAM:SSF52151	UniParc:UPI000221662F	EnsemblPlantsGene:Zm00001d034340	EnsemblPlants:Zm00001d034340_P001
EnsemblPlants:Zm00001d034340_T001	SEG:seg	:	:	:	:

Description

Patatin-like protein 6

Coordinates

chr1:-:290229241..290231041

Molecular Weight (calculated)

44823.1 Da

IEP (calculated)

8.727

GRAVY (calculated)

0.068

Length

438 amino acids

Sequence
(BLAST)

001: MESARAAADQ AAGLDVDKLT YEIFSILESK FLFGYDDPKL FSPASAGASP SPGAAAAAAA SSKVCILSID GGGGGGRAAD GLLAGAALVR LEASLRRRTG
101: DDGARLADFF DVAAGSGAGG VLAAMLVARG ADGRPRFSAD DALAFLLRSL RRGSGGLGLG LGLRALFKSL RRPGGGAAAA FRGVFGDLTL RDTVRPVLVP
201: CYDLGTAAPF LFSRADAVET RAYDFRLRDV CAATCAGDSV EARSCDGSTR IAAVGGGVAL ANPTAAAITH VLNNRRDFPL AAGVDDLLVV SIGSGEADQR
301: GAASSASQIV RIAAEGVADT VDQAVAMAFG HNRTTNYIRI QATGTPRGAS RGAAAEAEEM LAQRNVESVL FRGKVVAEQT NAEKLERLAH ELVKERDRRR
401: ASASASPAAA APALVKHHRP SAAPSYSSLV SHTLASIM

Best Arabidopsis Sequence Match ( AT3G54950.1 )
(BLAST)

001: MHRVRNKPVK STATASVKHL IKQRGGDGAT AASKSANDYN NNDSLLTDMQ EPSIDTDKLS YEIFSILESK FLFGYDDSKP EPANSVVAGS IKNQRGKICI
101: LSIDGGGMRG ILPGKALAYL EHALKSKSGD PNARIADYFD VAAGSGIGGI YTAMLFGSRD GNRPIFKADD TWQFLTRNAK GLYGGAGILK RVLRTGSGCC
201: SGTAKLKKVM KESFSELTLK DTLKPVLIPC YDLKSSGPFL FSRADALETD GYDFRLSEVC RATWAEPGVF EPVEMKSVDG QTKCVAVGGG LAMSNPTAAA
301: ITHVLHNKQE FPFVRGVEDL LVLSLGMGQL LDVSYEYDRI IKWKAKHWAR PAALISNDGA ADTVDQAVAM AFGHCRSSNY VRIQANGSNL GPWSPNMDTD
401: PSGSNVNMLM GVAEEMLKQK NVESVLFGGK RIDEQSNFEK LDWLAGELVL EHQRRNSRIA PTVAFKQSVH RADQKTSDKD IGVTARER

Arabidopsis Description

PLP7Patatin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.