Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- vacuole 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g079260.2.1 | Tomato | cytosol | 90.12 | 89.9 |
| KRH05706 | Soybean | cytosol, extracellular, nucleus | 66.91 | 72.07 |
| VIT_18s0001g11010.t01 | Wine grape | cytosol | 71.36 | 71.18 |
| KRH15336 | Soybean | cytosol | 71.11 | 70.59 |
| VIT_18s0001g10880.t01 | Wine grape | cytosol | 70.12 | 69.95 |
| VIT_18s0001g10980.t01 | Wine grape | cytosol, peroxisome, plastid | 67.41 | 69.82 |
| VIT_18s0001g10950.t01 | Wine grape | cytosol, peroxisome, plastid | 69.63 | 69.46 |
| KRH05707 | Soybean | cytosol | 70.12 | 69.44 |
| VIT_18s0001g10970.t01 | Wine grape | cytosol, peroxisome, plastid | 69.38 | 69.21 |
| VIT_18s0001g10940.t01 | Wine grape | cytosol, peroxisome, plastid | 69.14 | 68.97 |
| Solyc04g079240.2.1 | Tomato | nucleus | 69.88 | 68.69 |
| KRH51959 | Soybean | nucleus | 70.12 | 68.6 |
| KRH15337 | Soybean | cytosol | 26.17 | 64.24 |
| VIT_18s0001g10920.t01 | Wine grape | extracellular | 67.9 | 63.07 |
| Solyc02g090630.2.1 | Tomato | cytosol | 60.99 | 62.53 |
| Solyc04g079220.1.1 | Tomato | cytosol | 10.86 | 58.67 |
| GSMUA_Achr3P06850_001 | Banana | cytosol | 58.77 | 58.33 |
| Solyc04g079210.2.1 | Tomato | cytosol | 23.21 | 58.02 |
| Solyc03g044710.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 53.83 | 53.17 |
| Solyc02g090490.2.1 | Tomato | extracellular | 53.83 | 52.91 |
| Solyc02g065090.2.1 | Tomato | nucleus | 53.09 | 51.19 |
| Solyc02g065100.1.1 | Tomato | endoplasmic reticulum, extracellular | 50.62 | 49.88 |
| Solyc02g090660.1.1 | Tomato | cytosol, peroxisome, plastid | 33.58 | 49.28 |
| Solyc08g006850.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 42.72 | 45.89 |
| Solyc08g006860.2.1 | Tomato | extracellular | 42.47 | 44.91 |
| Solyc10g080690.1.1 | Tomato | cytosol | 26.91 | 25.23 |
| Solyc05g056030.2.1 | Tomato | cytosol | 28.15 | 24.46 |
| Solyc10g078530.1.1 | Tomato | cytosol | 25.43 | 23.68 |
| Solyc09g065240.2.1 | Tomato | cytosol | 22.22 | 23.5 |
Protein Annotations
| Gene3D:3.40.1090.10 | MapMan:5.7.2.2.3 | InterPro:Acyl_Trfase/lysoPLipase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004620 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0047372 |
| InterPro:IPR002641 | UniProt:K4BV09 | PFAM:PF01734 | InterPro:PNPLA_dom | PFscan:PS51635 | PANTHER:PTHR32176 |
| PANTHER:PTHR32176:SF6 | SUPFAM:SSF52151 | EnsemblPlantsGene:Solyc04g079250.2 | EnsemblPlants:Solyc04g079250.2.1 | UniParc:UPI0002766FE0 | : |
Description
Patatin [Source:UniProtKB/TrEMBL;Acc:K4BV09]
Coordinates
chr4:-:63768619..63770569
Molecular Weight (calculated)
44928.0 Da
IEP (calculated)
6.795
GRAVY (calculated)
-0.257
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKTSQIQP PTYGDLITVL SIDGGGIRGI IPATILSFLE SQLQELDGKE ARLADYFDVI AGTSTGGLVT AMLTAPDENN RPLYAAKDIT PFYLEHCPKI
101: FPQKKCGLFA PIGNIVQTLI GPKYDGKYLH QVVKEKLKDT RLSNTITNVV IPTFDIKKLQ PTIFSTYETK RAACYDAKLS DICISTSAAP TYLPAHYFKV
201: EDTKGNFKEH HLIDGGVAAN NPGLIAISEV SKEIFKNNPD FYPIKPMEYG RFLVISLGTG AAKYEQKYNS SMAAKWGILE WLLNKGSNPL IEVFTQSSAD
301: MVDYHNSVVF QALRSEDSYL RIQEDELSGT EASVDVATKE NLERLVEIGE NLLKKPLSRV NLETGLSEPI PKGGTNEEAL KRFATLLVNE RRLRESKSPL
401: IIKKA
101: FPQKKCGLFA PIGNIVQTLI GPKYDGKYLH QVVKEKLKDT RLSNTITNVV IPTFDIKKLQ PTIFSTYETK RAACYDAKLS DICISTSAAP TYLPAHYFKV
201: EDTKGNFKEH HLIDGGVAAN NPGLIAISEV SKEIFKNNPD FYPIKPMEYG RFLVISLGTG AAKYEQKYNS SMAAKWGILE WLLNKGSNPL IEVFTQSSAD
301: MVDYHNSVVF QALRSEDSYL RIQEDELSGT EASVDVATKE NLERLVEIGE NLLKKPLSRV NLETGLSEPI PKGGTNEEAL KRFATLLVNE RRLRESKSPL
401: IIKKA
001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI
Arabidopsis Description
PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.