Factsheet for TraesCS5D01G249800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3B01G540300.1
TraesCS3B01G540900.1
TraesCS3D01G485500.1
TraesCS3D01G486000.1
TraesCS5A01G243200.1
TraesCS5B01G241100.2
TraesCS5D01G249800.1
TraesCS7A01G054800.2
TraesCS7D01G049900.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26560.1	TraesCS3B01G540300.1	AT1G34570.1	21798944
AT2G26560.1	TraesCS3B01G540900.1	AT1G34570.1	21798944
AT2G26560.1	TraesCS3D01G485500.1	AT1G34570.1	21798944
AT2G26560.1	TraesCS3D01G486000.1	AT1G34570.1	21798944
AT2G26560.1	TraesCS7A01G054800.2	AT1G34570.1	21798944
AT2G26560.1	TraesCS7D01G049900.2	AT1G34570.1	21798944
AT2G26560.1	TraesCS5A01G243200.1	AT2G26560.1	21798944
AT2G26560.1	TraesCS5B01G241100.2	AT2G26560.1	21798944
AT2G26560.1	TraesCS5D01G249800.1	AT2G26560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G243200.1	Wheat	cytosol	98.02	98.02
TraesCS5B01G241100.2	Wheat	cytosol	97.28	96.57
HORVU5Hr1G069130.5	Barley	cytosol	96.54	96.54
Os09t0462400-00	Rice	cytosol	73.33	86.84
Zm00001d005911_P001	Maize	cytosol	84.69	85.32
KXG35787	Sorghum	cytosol	82.22	84.73
GSMUA_Achr11P...	Banana	cytosol	57.28	68.64
VIT_18s0001g10850.t01	Wine grape	cytosol	68.89	67.55
VIT_18s0001g10870.t01	Wine grape	cytosol	68.64	67.31
VIT_18s0001g10910.t01	Wine grape	cytosol	68.4	67.07
Bra000578.1-P	Field mustard	cytosol	66.42	66.42
CDY21469	Canola	cytosol, peroxisome, vacuole	66.42	66.09
CDX83197	Canola	cytosol	66.17	65.85
VIT_18s0001g10930.t01	Wine grape	cytosol	50.12	64.86
AT2G26560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.95	63.64
KRH15338	Soybean	cytosol	62.96	62.5
KRH15334	Soybean	cytosol	62.72	62.25
VIT_18s0001g10900.t01	Wine grape	cytosol	30.62	61.69
VIT_18s0001g10830.t01	Wine grape	mitochondrion, plasma membrane, plastid	69.14	60.87
KRH05709	Soybean	cytosol	60.99	60.54
KRH05708	Soybean	cytosol	56.3	60.48
TraesCS7D01G178600.1	Wheat	cytosol	54.32	53.92
TraesCS4D01G285300.1	Wheat	plastid	57.28	53.58
TraesCS3D01G033200.1	Wheat	plastid	57.28	53.58
TraesCS3D01G033500.1	Wheat	plastid	57.28	53.58
TraesCS2D01G166800.1	Wheat	cytosol	53.58	53.45
TraesCS1D01G302900.1	Wheat	cytosol	53.33	53.33
TraesCS7D01G491300.1	Wheat	plastid	33.83	53.31
TraesCS1D01G060500.1	Wheat	cytosol	54.07	53.28
TraesCS7D01G034300.1	Wheat	mitochondrion	54.07	53.03
TraesCS7D01G491900.1	Wheat	plastid	54.32	52.13
TraesCS5D01G528100.1	Wheat	cytosol	50.12	51.79
TraesCS5D01G528000.1	Wheat	cytosol, peroxisome, plastid	49.88	50.5
TraesCS3D01G033600.1	Wheat	mitochondrion, peroxisome	37.53	50.33
TraesCS7D01G491200.1	Wheat	mitochondrion, plastid	52.35	50.24
TraesCS4D01G284700.1	Wheat	mitochondrion	50.62	48.58
TraesCS6D01G007000.1	Wheat	cytosol, peroxisome, plastid	36.05	32.52
TraesCS5D01G430400.1	Wheat	cytosol	25.93	26.72
TraesCS4D01G221300.1	Wheat	cytosol	27.9	24.62
TraesCS5D01G430300.1	Wheat	plastid	27.16	22.92
TraesCS7D01G452000.1	Wheat	cytosol	23.21	22.43
TraesCS5D01G385900.1	Wheat	cytosol	24.2	22.12
TraesCS5D01G057600.1	Wheat	cytosol, peroxisome, plastid	25.68	21.67

Protein Annotations

Gene3D:3.40.1090.10	MapMan:5.7.2.2.3	InterPro:Acyl_Trfase/lysoPLipase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008219	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009626
GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0016298	GO:GO:0016787	GO:GO:0031408
GO:GO:0046686	GO:GO:0051607	GO:GO:0071456	InterPro:IPR002641	PFAM:PF01734	InterPro:PNPLA_dom
PFscan:PS51635	PANTHER:PTHR32176	PANTHER:PTHR32176:SF6	SUPFAM:SSF52151	EnsemblPlantsGene:TraesCS5D01G249800	EnsemblPlants:TraesCS5D01G249800.1
TIGR:cd07214	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:356201918..356204400

Molecular Weight (calculated)

44956.4 Da

IEP (calculated)

9.644

GRAVY (calculated)

-0.224

Length

405 amino acids

Sequence
(BLAST)

001: METGKHILCR QPPTYGNLIT ILSIDGGGIR GIIPAVALAF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK KRRPLFAAKD IQAFYMNHAP
101: RIFPQLRGVF GRIMRILRSL SGPYYDGKYL HEVVRKKLGS ARLHQTLTNV VIPTFDIKRL QPTIFSSYEV KKKKKNTMNA LLSDICISTS AAPTYLPAHY
201: FKTEDSHGNI KEFNLIDGGV AANNPALVAI GEVSKQIFKQ DPDFFPIKPM DYGRFLVISL GTGSSKFEEK YDAQKAKSWG VLDWLLSSGS TPLVDIFTRA
301: SADMVDIHIA SVFKALHSEQ NYLRIQDDKL RGTLSSVDVA TKDNLEKLVN VGEMLLKKPV SRANLETGQM VPACSDTEET NEEALKRFAK LLSDEKQIRQ
401: ARSPK

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.