Factsheet for TraesCS4B01G286000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G284700.1	Wheat	mitochondrion	97.16	97.39
TraesCS4A01G018100.1	Wheat	cytosol	96.22	96.45
HORVU4Hr1G074970.1	Barley	mitochondrion	95.04	95.26
Os03t0393900-01	Rice	mitochondrion	79.91	78.24
Zm00001d029412_P001	Maize	mitochondrion	76.6	75.7
EER94748	Sorghum	mitochondrion	77.54	75.06
TraesCS1B01G077500.1	Wheat	cytosol, peroxisome, plastid	52.72	54.66
TraesCS3B01G036100.1	Wheat	cytosol	34.75	54.04
TraesCS1B01G313800.1	Wheat	cytosol	51.3	53.45
TraesCS6B01G170200.1	Wheat	plastid	52.72	52.47
TraesCS7B01G082400.1	Wheat	cytosol	50.35	52.21
TraesCS2B01G185200.1	Wheat	cytosol	49.17	51.11
TraesCS5B01G529100.1	Wheat	cytosol	47.28	51.02
TraesCS4B01G286600.1	Wheat	plastid	51.77	50.58
TraesCS5B01G241100.2	Wheat	cytosol	48.7	50.49
TraesCS3B01G036800.1	Wheat	plastid	51.3	50.0
TraesCS7B01G411800.1	Wheat	plastid	50.12	49.53
TraesCS5B01G529000.1	Wheat	cytosol	46.34	49.37
TraesCS7B01G411200.1	Wheat	plastid	49.17	49.29
TraesCS7B01G411300.1	Wheat	mitochondrion	47.28	47.73
TraesCS3B01G036500.1	Wheat	plastid	42.55	40.54
TraesCS6B01G009800.1	Wheat	cytosol	34.04	32.21
TraesCS3B01G001300.1	Wheat	cytosol	40.66	31.79
TraesCS5B01G424100.1	Wheat	cytosol	25.06	26.97
TraesCS4B01G221000.1	Wheat	cytosol	28.61	26.3
TraesCS5B01G423900.1	Wheat	cytosol	26.24	25.0
TraesCS7B01G364900.1	Wheat	cytosol	21.99	22.96
TraesCS5B01G052000.1	Wheat	cytosol, peroxisome, plastid	24.35	21.28
TraesCS5B01G379300.1	Wheat	plastid	23.4	20.41

Protein Annotations

EnsemblPlants:TraesCS4B01G286000.1	EnsemblPlantsGene:TraesCS4B01G286000	Gene3D:3.40.1090.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:Acyl_Trfase/lysoPLipase	InterPro:IPR002641	InterPro:PNPLA_dom	PANTHER:PTHR32176	PANTHER:PTHR32176:SF5	PFAM:PF01734
PFscan:PS51635	SEG:seg	SUPFAM:SSF52151	TIGR:cd07214	MapMan:5.7.2.2.3	:

Description

No Description!

Coordinates

chr4B:+:569628760..569630327

Molecular Weight (calculated)

45859.4 Da

IEP (calculated)

8.975

GRAVY (calculated)

-0.168

Length

423 amino acids

Sequence
(BLAST)

001: MMASYWCRRP CESCSTRAMA GSVVGQPVAP GQRVTVLTID GGGIRGLIPG TILAFLEAKL QELDGPGARL ADYFDCIAGT STGGLITAMI TAPGKDGRPL
101: FAAKDVNRFY LDNGPYIFPQ RRCALAAVTA SLRRPRYNGK YLHGKIRSML GETRLCDALT DVVIPTFDVK LLQPIIFSTY DARCMPLKNA RLADVCIGTS
201: AAPTCLPAHH FHTHDGNGKE REYNLIDGGV AANNPTMVAM TQITKKMMGK DREELYPVEP SDCGKFLVLS VGTGSTSDQG LYTAKQCSQW GIISWLRNKG
301: MAPIIDIFMA ASSDLVDIHA AVLFQSLHSD ANYLRIQDNS LHGPAATVDA ATPENMAELL RIGERMLAQR VSRVNVETGR YEEIKGAGSN ADALAGFARQ
401: LSDERRTRLG RRRGGAGRLK SSR

Best Arabidopsis Sequence Match ( AT2G26560.1 )
(BLAST)

001: MQMDSPKSPL QPPTYGNLVT ILSIDGGGIR GLIPAVILGF LESELQKLDG EEARLADYFD VIAGTSTGGL VTAMLTAPNK EGRPLFAASE IKDFYLEQCP
101: KIFPQDHFPF SAAKKLVKSL TGPKYDGKYL HQLIHAKLGD TKLSQTLTNV VIPTFDIKHL QPTIFSSYEV KNHPLKDATL ADIAISTSAA PTYLPAHFFK
201: VEDLNGNAKE YNLIDGGVAA NNPALLAIGE VTNEISGGSS DFFPIRPNDY GRFLVLSLGT GNHKAEEKFN AKEVAGWGLL NWLTHDNSTP IIDAFSQASS
301: DMVDFHLSAV FRALHSEANY IRIQDDTLTG DAASVDIATV ENLDILAKTG DELLKKPVAR VNLDSGCNEN AYETTNEHAL IKLAGILSKE KKIRDIRSPH
401: AKAPIRI

Arabidopsis Description

PLP2Patatin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48723]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.