Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- vacuole 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g121970.1.1 | Tomato | nucleus | 85.07 | 83.82 |
| VIT_09s0002g01520.t01 | Wine grape | nucleus | 47.26 | 63.55 |
| KRH06149 | Soybean | nucleus | 51.24 | 47.8 |
| KRH47572 | Soybean | nucleus | 50.0 | 46.74 |
| PGSC0003DMT400030328 | Potato | nucleus | 19.4 | 45.35 |
| PGSC0003DMT400055964 | Potato | nucleus | 39.05 | 40.57 |
| PGSC0003DMT400030330 | Potato | nucleus | 21.39 | 40.57 |
| PGSC0003DMT400050356 | Potato | mitochondrion, nucleus | 15.92 | 21.26 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400006604 | EnsemblPlantsGene:PGSC0003DMG400002570 | EntrezGene:102605706 | PANTHER:PTHR33541 | PANTHER:PTHR33541:SF7 | PGSC:PGSC0003DMG400002570 |
| RefSeq:XP_006342948.1 | SEG:seg | UniParc:UPI000294E011 | UniProt:M0ZRP2 | MapMan:35.1 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002570]
Coordinates
chr3:+:61189201..61190852
Molecular Weight (calculated)
45046.5 Da
IEP (calculated)
8.670
GRAVY (calculated)
-0.828
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRYSYQRER EISHSSNPSF SSTLLDAIYR SIDQGEEEEV VLYKETMRKK QSSNNMESFQ KACMIEKWME HKVSEKVVVR RKSIADLERK SRNLMNSSSS
101: SSDSSCGGVF SSSETESSYN NVVVNPAGSS SSCYGLNRPK PIRTSISSTN PEKLSKNQAK QLNNYGHNNP QMERDFAPKT KSETGFIKTK SKALKIYGDL
201: KKVKQPISPG GRLASFLNSL FTAGNTKKPK VVSANASSTC SSASSFSRSC LSKSTPKSSS NGTKRSVRFY PVSIIVDEDC QPCGHKNLYE EKIPNPESLK
301: NIRNSINDEL KFHSMEKNHR VEEATKELLR NYQRNSNSQI KKMEIFDDED EDDGASCASS DLFELDNLSA IGIDSNRYLE ELPVYETTHL DTNRAIANGL
401: IL
101: SSDSSCGGVF SSSETESSYN NVVVNPAGSS SSCYGLNRPK PIRTSISSTN PEKLSKNQAK QLNNYGHNNP QMERDFAPKT KSETGFIKTK SKALKIYGDL
201: KKVKQPISPG GRLASFLNSL FTAGNTKKPK VVSANASSTC SSASSFSRSC LSKSTPKSSS NGTKRSVRFY PVSIIVDEDC QPCGHKNLYE EKIPNPESLK
301: NIRNSINDEL KFHSMEKNHR VEEATKELLR NYQRNSNSQI KKMEIFDDED EDDGASCASS DLFELDNLSA IGIDSNRYLE ELPVYETTHL DTNRAIANGL
401: IL
001: MEITWEKPKS SSHHRNPSFS STLLDQIYRS IDDSSPPPPL ESIKKKKHHH QQRNASLHED REISPIYHRR SIAADFERSR RKTDFLRHSN SSSSDSSGFS
101: SSESDSFHGR SKSSASPPSS SRQQPKPIRT SSVDHSSAVQ KPKELGGFLR TKSKALKIYS DLKKVKQPIS PGGRLATFLN SLFTNAATNP KKHKKTTTVA
201: VVEEPHSSST CSSASSFSRS CLSKTPSSSG KSKRSVRFCP VNVILDEDSS FTMPYAYNNE RLYDNNEAKR VEEHRRVIQA AKDLLRTYHN KNKVTTTNIN
301: NVEEDDEDDA ASCASSDLFE LENLSAIGIE RYREELPVYE TTRLDNMNRV IATGLIV
101: SSESDSFHGR SKSSASPPSS SRQQPKPIRT SSVDHSSAVQ KPKELGGFLR TKSKALKIYS DLKKVKQPIS PGGRLATFLN SLFTNAATNP KKHKKTTTVA
201: VVEEPHSSST CSSASSFSRS CLSKTPSSSG KSKRSVRFCP VNVILDEDSS FTMPYAYNNE RLYDNNEAKR VEEHRRVIQA AKDLLRTYHN KNKVTTTNIN
301: NVEEDDEDDA ASCASSDLFE LENLSAIGIE RYREELPVYE TTRLDNMNRV IATGLIV
Arabidopsis Description
Protein BIG GRAIN 1-like A [Source:UniProtKB/Swiss-Prot;Acc:Q9LVK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.