Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
- endoplasmic reticulum 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g081530.1.1 | Tomato | plastid | 86.54 | 87.1 |
| PGSC0003DMT400061357 | Potato | plastid | 33.97 | 34.64 |
| PGSC0003DMT400056986 | Potato | plastid | 32.69 | 31.68 |
| VIT_18s0001g14440.t01 | Wine grape | plastid | 41.03 | 29.22 |
| PGSC0003DMT400056985 | Potato | plastid | 29.49 | 28.05 |
| PGSC0003DMT400009189 | Potato | plastid | 25.64 | 27.97 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:102600881 | MapMan:35.1 | ProteinID:AFW90645 | ProteinID:AFW90645.1 | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | InterPro:IPR001623 | InterPro:IPR036869 | EMBL:JX576289 | InterPro:J_dom_sf | UniProt:M1ALK9 |
| PFAM:PF00226 | EnsemblPlantsGene:PGSC0003DMG400009869 | PGSC:PGSC0003DMG400009869 | EnsemblPlants:PGSC0003DMT400025543 | PRINTS:PR00625 | ScanProsite:PS00636 |
| PFscan:PS50076 | PANTHER:PTHR44240 | PANTHER:PTHR44240:SF3 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000296963A |
| RefSeq:XP_006342061.1 | SEG:seg | : | : | : | : |
Description
DNAJ [Source:PGSC_GENE;Acc:PGSC0003DMG400009869]
Coordinates
chr4:+:70887701..70888496
Molecular Weight (calculated)
17138.9 Da
IEP (calculated)
10.434
GRAVY (calculated)
-0.457
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSFLLST SIAGSKLSAA APPSRSVSFR QRPFSVSAAY STAERTSTTT TSSSSTIASH TSLYEVLGIQ IGANSHEIKS AYRKLARILH PDVQNSSAED
101: FIRVQSAYAT LSDPEKRANY DRKLFGNRIA RPVDFSPAGA RSHYTVRRKW ETDQCW
101: FIRVQSAYAT LSDPEKRANY DRKLFGNRIA RPVDFSPAGA RSHYTVRRKW ETDQCW
001: MLSSSPTSFT HPFLSSSPPL SPISPPSRTA RISPPLVSAS CSYTYTEDSP RLHQIPRRLT TVPASLYDVL EVPLGATSQD IKSAYRRLAR ICHPDVAGTD
101: RTSSSSADEF MKIHAAYCTL SDPEKRSVYD RRMLRRSRPL TVGTSGLGSY VGRNWETDQC W
101: RTSSSSADEF MKIHAAYCTL SDPEKRSVYD RRMLRRSRPL TVGTSGLGSY VGRNWETDQC W
Arabidopsis Description
ATJ11At4g36040 [Source:UniProtKB/TrEMBL;Acc:Q1H544]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.