Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0014g03560.t01 | Wine grape | nucleus | 12.57 | 8.43 |
| PGSC0003DMT400051746 | Potato | nucleus | 10.78 | 3.1 |
| PGSC0003DMT400051934 | Potato | nucleus | 10.78 | 2.9 |
| PGSC0003DMT400052167 | Potato | nucleus | 4.79 | 2.79 |
| CDX68809 | Canola | cytosol | 1.2 | 1.53 |
| PGSC0003DMT400057590 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400078282 | Potato | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400064355 | EnsemblPlantsGene:PGSC0003DMG400025003 | PANTHER:PTHR23336 | PANTHER:PTHR23336:SF10 | PGSC:PGSC0003DMG400025003 | UniParc:UPI000296E954 |
| UniProt:M1CC81 | MapMan:35.1 | : | : | : | : |
Description
Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400025003]
Coordinates
chr10:+:1756297..1763200
Molecular Weight (calculated)
19066.7 Da
IEP (calculated)
8.158
GRAVY (calculated)
-0.413
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPSSSTTT FCFQCEDSSN SVTFRNGWRL RSGKFAQLCH RCASVYEYGR FCVTFHSSDD GWRDCESCGK LIHCGCIVSF NSYLLLDFGG IMCMECSKKN
101: FILARNRCLS HETPVLTEES QLDATQTVIE PQYRPRVTES KLQKISIKYP LLYTQSSWPP KTRKGEH
101: FILARNRCLS HETPVLTEES QLDATQTVIE PQYRPRVTES KLQKISIKYP LLYTQSSWPP KTRKGEH
001: MLSSSSMSSS SLSARFCFNH ECFEFKLDHC RPGWRLRSGD FVDLCDRCAS AYEQGKFCDV FHQRASGWRC CESCGKRIHC GCIASASAYT LMDAGGIECL
101: ACARKKFALG PNFSPSPSFL FQSPISEKFK DLSINWSSST RSNQISYQPP SCLDPSVLQF DFRNRGGNNE FSQPASKERV TACTMEKKRG MNDMIGKLMS
201: ENSKHYRVSP FPNVNVYHPL ISLKEGPCGT QLAFPVPITT PIEKTGHSRL DGSNLWHTRN SSPLSRLHND LNGGADSPFE SKSRNVMAHL ETPGKYQVVP
301: RFWPKVSYKN QVLQNQSKES ESVVTPLFEK ILSATDTGKR LVLPKKYAEA FLPQLSHTKG VPLTVQDPMG KEWRFQFRFW PSSKGRIYVL EGVTPFIQTL
401: QLQAGDTVIF SRLDPERKLI LGFRKASITQ SSDQADPADM HSPFEVKKSA YITKETPGVE CSSGKKKSSM MITRSKRQKV EKGDDNLLKL TWEEAQGFLL
501: PPPNLTPSRV VIEDYEFEEY EEAPIIGKPT DVAGFRSTCT EVEGLLISPT TTKHPRHRDG CTCIICIQSP SGIGPKHDRC CSCAVCDTNK RRRRSLLLRR
601: EKKQMEKEDN ARKLLEQLNS DNGLHQSANN SENHERHASP LKVQLDLNFK PEKDEESLPG SNKTTKSETL PHDDTVKSSF TSPSSSSAHS QNNKEDEGKL
701: KTTTEIADTT TTSSM
101: ACARKKFALG PNFSPSPSFL FQSPISEKFK DLSINWSSST RSNQISYQPP SCLDPSVLQF DFRNRGGNNE FSQPASKERV TACTMEKKRG MNDMIGKLMS
201: ENSKHYRVSP FPNVNVYHPL ISLKEGPCGT QLAFPVPITT PIEKTGHSRL DGSNLWHTRN SSPLSRLHND LNGGADSPFE SKSRNVMAHL ETPGKYQVVP
301: RFWPKVSYKN QVLQNQSKES ESVVTPLFEK ILSATDTGKR LVLPKKYAEA FLPQLSHTKG VPLTVQDPMG KEWRFQFRFW PSSKGRIYVL EGVTPFIQTL
401: QLQAGDTVIF SRLDPERKLI LGFRKASITQ SSDQADPADM HSPFEVKKSA YITKETPGVE CSSGKKKSSM MITRSKRQKV EKGDDNLLKL TWEEAQGFLL
501: PPPNLTPSRV VIEDYEFEEY EEAPIIGKPT DVAGFRSTCT EVEGLLISPT TTKHPRHRDG CTCIICIQSP SGIGPKHDRC CSCAVCDTNK RRRRSLLLRR
601: EKKQMEKEDN ARKLLEQLNS DNGLHQSANN SENHERHASP LKVQLDLNFK PEKDEESLPG SNKTTKSETL PHDDTVKSSF TSPSSSSAHS QNNKEDEGKL
701: KTTTEIADTT TTSSM
Arabidopsis Description
VAL3VP1/ABI3-like 3 [Source:TAIR;Acc:AT4G21550]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.