Factsheet for Solyc02g093830.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
plastid: 26371478

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052250	Potato	cytosol	92.37	92.37
VIT_14s0171g00490.t01	Wine grape	cytosol	84.54	83.72
AT5G40760.1	Thale cress	cytosol	83.76	83.11
Bra028474.1-P	Field mustard	cytosol	82.78	82.3
GSMUA_Achr8P28750_001	Banana	cytosol	82.0	80.58
KRH07037	Soybean	endoplasmic reticulum	81.6	80.5
CDX67476	Canola	cytosol	82.19	80.15
KRG94401	Soybean	cytosol, endoplasmic reticulum, mitochondrion	81.21	80.12
CDY11711	Canola	cytosol	82.39	79.14
Os04t0485300-01	Rice	cytosol, mitochondrion, plastid	77.5	78.42
CDX83677	Canola	cytosol	79.84	78.31
CDY20053	Canola	cytosol	78.86	78.25
KRG94338	Soybean	cytosol, nucleus	79.45	78.23
CDY00159	Canola	cytosol	80.04	78.2
TraesCS2B01G362700.1	Wheat	cytosol, unclear	77.3	77.6
HORVU2Hr1G083940.2	Barley	cytosol	77.3	77.6
TraesCS2A01G320400.1	Wheat	cytosol, golgi	77.3	77.6
Zm00001d003252_P003	Maize	cytosol	76.71	77.32
KXG26589	Sorghum	cytosol	76.71	77.32
Bra025264.1-P	Field mustard	cytosol	66.93	77.2
Os02t0600400-01	Rice	golgi, plasma membrane	77.89	76.98
CDY13701	Canola	cytosol	79.06	76.23
KXG30566	Sorghum	plastid	76.91	75.87
GSMUA_Achr9P07730_001	Banana	cytosol	79.65	75.65
Zm00001d017119_P003	Maize	peroxisome	76.32	75.44
Bra039084.1-P	Field mustard	cytosol	76.91	75.43
TraesCS6A01G211600.1	Wheat	peroxisome	75.93	75.05
TraesCS6D01G195700.1	Wheat	peroxisome	75.93	75.05
TraesCS6B01G243100.2	Wheat	peroxisome	75.54	74.66
AT3G27300.4	Thale cress	endoplasmic reticulum	79.26	68.99
GSMUA_Achr6P28350_001	Banana	cytosol	82.39	67.9
Solyc05g015950.2.1	Tomato	plastid	41.29	36.19
Solyc07g045540.2.1	Tomato	plastid	40.31	35.7
Solyc01g100950.2.1	Tomato	cytosol	13.89	31.0

Protein Annotations

KEGG:00030+1.1.1.49	KEGG:00480+1.1.1.49	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:3.9.1.1	InterPro:G6P_DH
InterPro:G6P_DH_AS	InterPro:G6P_DH_C	InterPro:G6P_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004345	GO:GO:0005488	GO:GO:0005975	GO:GO:0006006	GO:GO:0006098	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114
UniProt:K4BDH9	HAMAP:MF_00966	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00479	PFAM:PF02781	PIRSF:PIRSF000110
PRINTS:PR00079	ScanProsite:PS00069	PANTHER:PTHR23429	PANTHER:PTHR23429:SF6	SUPFAM:SSF51735	SUPFAM:SSF55347
EnsemblPlantsGene:Solyc02g093830.2	EnsemblPlants:Solyc02g093830.2.1	TIGRFAMs:TIGR00871	UniParc:UPI00027688C2	:	:

Description

Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:K4BDH9]

Coordinates

chr2:+:54535934..54541841

Molecular Weight (calculated)

58574.2 Da

IEP (calculated)

6.855

GRAVY (calculated)

-0.421

Length

511 amino acids

Sequence
(BLAST)

001: MAASWCIEKR GSIRNDSFRD NDNIPETGCL SIIVLGASGD LAKKKTFPAL FNLYRQGFLQ SNEVHIFGYA RTKISDDDLR SRIRGYLSRG KENEGEVLEF
101: LQLIKYVSGS YDSGEGFTLL DKAISEHEFS KNSTEGSSRR LFYFALPPSV YPSVCRMIKS YCMNKSDLGG WTRIVVEKPF GKDLASSEQL SSQIGELFDE
201: PQIYRIDHYL GKELVQNLLV LRFANRFFLP LWNRDNIDNI QIVFREDFGT EGRGGYFDEY GIIRDIIQNH LLQVLCLVAM EKPVSQKPEH IRDEKVKVLQ
301: SMLPIKDEEV VLGQYEGYKD DPTVPNNSNT PTFATMVLRI HNERWEGVPF IMKAGKALNS RKAEIRVQFK DVPGDIFRCQ KQGRNEFVIR LQPSEAMYMK
401: LTVKKPGLEM STVQSELDLS YGQRYQGVVI PEAYERLILD TIRGDQQHFV RRDELKAAWE IFTPLLHRID NGEVKPIPYK PGSRGPAEAD ELLQHAGYVQ
501: THGYIWIPPT L

Best Arabidopsis Sequence Match ( AT5G40760.1 )
(BLAST)

001: MGSGQWHVEK RSTFRNDSFV REYGIVPETG CLSIIVLGAS GDLAKKKTFP ALFNLYRQGF LNPDEVHIFG YARTKISDEE LRDRIRGYLV DEKNAEQAEA
101: LSKFLQLIKY VSGPYDAEEG FQRLDKAISE HEISKNSTEG SSRRLFYLAL PPSVYPSVCK MIKTCCMNKS DLGGWTRIVV EKPFGKDLES AEQLSSQIGE
201: LFDESQIYRI DHYLGKELVQ NMLVLRFANR FFLPLWNRDN IENVQIVFRE DFGTEGRGGY FDEYGIIRDI IQNHLLQVLC LVAMEKPISL KPEHIRDEKV
301: KVLQSVVPIS DDEVVLGQYE GYRDDDTVPN DSNTPTFATT ILRIHNERWE GVPFILKAGK ALNSRKAEIR IQFKDVPGDI FRCQKQGRNE FVIRLQPSEA
401: MYMKLTVKQP GLDMNTVQSE LDLSYGQRYQ GVAIPEAYER LILDTIKGDQ QHFVRRDELK VAWEIFTPLL HRIDKGEVKS IPYKPGSRGP KEADQLLEKA
501: GYLQTHGYIW IPPTL

Arabidopsis Description

ACG12Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UA94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.