Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076107 | Potato | cytosol | 89.43 | 51.4 |
| Solyc08g074340.1.1 | Tomato | cytosol, extracellular | 31.3 | 38.31 |
| Solyc08g006010.2.1 | Tomato | cytosol | 50.81 | 29.83 |
| Solyc06g048510.2.1 | Tomato | cytosol | 40.24 | 23.8 |
| Solyc01g099400.2.1 | Tomato | mitochondrion | 26.02 | 20.19 |
| Solyc07g006120.2.1 | Tomato | cytosol | 21.14 | 14.25 |
Protein Annotations
| MapMan:19.3.2.1.3 | GO:GO:0000422 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006497 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0019898 | GO:GO:0032266 | GO:GO:0034045 |
| GO:GO:0034497 | GO:GO:0044804 | GO:GO:0080025 | UniProt:K4BUB0 | PANTHER:PTHR11227 | PANTHER:PTHR11227:SF33 |
| SUPFAM:SSF50978 | EnsemblPlantsGene:Solyc04g076720.1 | EnsemblPlants:Solyc04g076720.1.1 | UniParc:UPI0002766047 | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chr4:-:61621234..61622281
Molecular Weight (calculated)
27740.9 Da
IEP (calculated)
7.629
GRAVY (calculated)
-0.378
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTPSPFSPP FPLPNTSSKF QSLNLQRYLE QPKAQQHQLQ PQQAAVEQVN DESLHGSSIK NPESGVGSNH VFVNHSATAY HVTFNQDYDC FAIGTDRGFG
101: VYNCPFRNIL AFVGHGDHPK YPRNKVMIWD DQQSRCIHEL CFWSEVRRIR LLKDCLVLLF HIETTTNPKR IYEVSQTADH LVLVCPGLQK GQVWVKHSAS
201: KSNLLATAST KGTLIRIFNT LEGTLLQEPL VHSPSSEVSL KQIEGF
101: VYNCPFRNIL AFVGHGDHPK YPRNKVMIWD DQQSRCIHEL CFWSEVRRIR LLKDCLVLLF HIETTTNPKR IYEVSQTADH LVLVCPGLQK GQVWVKHSAS
201: KSNLLATAST KGTLIRIFNT LEGTLLQEPL VHSPSSEVSL KQIEGF
001: MATVSSSSWP NPNPNPDSTS ASDSDSTFPS HRDRVDEPDS LDSFSSMSLN SDEPNQTSNQ SPLSPPTPNL PVMPPPSVLH LSFNQDHACF AVGTDRGFRI
101: LNCDPFREIF RRDFDRGGGV AVVEMLFRCN ILALVGGGPD PQYPPNKVMI WDDHQGRCIG ELSFRSDVRS VRLRRDRIIV VLEQKIFVYN FSDLKLMHQI
201: ETIANPKGLC AVSQGVGSMV LVCPGLQKGQ VRIEHYASKR TKFVMAHDSR IACFALTQDG HLLATASSKG TLVRIFNTVD GTLRQEVRRG ADRAEIYSLA
301: FSSNAQWLAV SSDKGTVHVF GLKVNSGSQV KDSSRIAPDA TPSSPSSSLS LFKGVLPRYF SSEWSVAQFR LVEGTQYIAA FGHQKNTVVI LGMDGR
101: LNCDPFREIF RRDFDRGGGV AVVEMLFRCN ILALVGGGPD PQYPPNKVMI WDDHQGRCIG ELSFRSDVRS VRLRRDRIIV VLEQKIFVYN FSDLKLMHQI
201: ETIANPKGLC AVSQGVGSMV LVCPGLQKGQ VRIEHYASKR TKFVMAHDSR IACFALTQDG HLLATASSKG TLVRIFNTVD GTLRQEVRRG ADRAEIYSLA
301: FSSNAQWLAV SSDKGTVHVF GLKVNSGSQV KDSSRIAPDA TPSSPSSSLS LFKGVLPRYF SSEWSVAQFR LVEGTQYIAA FGHQKNTVVI LGMDGR
Arabidopsis Description
ATG18AAutophagy-related protein 18a [Source:UniProtKB/Swiss-Prot;Acc:Q93VB2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.