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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g009580.2.1 Tomato cytosol 79.77 77.41
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 48.66 48.3
OQU85465 Sorghum golgi 46.76 47.3
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 34.73 47.15
GSMUA_Achr10P... Banana plasma membrane 46.95 45.81
Solyc03g096820.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 49.81 45.71
Solyc03g119640.2.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 51.53 44.34
Zm00001d010130_P001 Maize cytosol 16.03 43.3
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 44.85 41.45
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 30.53 41.24
Zm00001d017928_P001 Maize plasma membrane 46.37 40.84
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 45.23 40.37
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 45.23 40.31
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 12.6 40.24
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 44.66 40.21
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 45.04 40.14
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 44.47 40.1
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 44.27 39.93
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 44.08 39.69
EER89585 Sorghum plastid 46.37 39.45
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 43.89 39.38
Zm00001d045696_P001 Maize mitochondrion, plastid 46.18 39.35
HORVU6Hr1G072900.3 Barley peroxisome 43.13 36.75
Zm00001d044350_P001 Maize mitochondrion 14.31 35.71
TraesCS6B01G321600.1 Wheat plasma membrane 43.32 34.34
Solyc08g082950.2.1 Tomato plasma membrane 26.14 28.78
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 25.38 28.48
Solyc09g065070.1.1 Tomato peroxisome 23.47 28.41
Solyc08g006990.1.1 Tomato cytosol, peroxisome, plasma membrane 28.82 28.38
Solyc11g071350.1.1 Tomato nucleus 23.47 27.46
Solyc06g061100.2.1 Tomato plasma membrane 27.1 27.2
Solyc10g081890.1.1 Tomato nucleus 24.81 27.2
Solyc06g074100.1.1 Tomato plasma membrane 24.05 26.98
Solyc01g096140.2.1 Tomato cytosol, peroxisome, plasma membrane 24.05 25.3
Solyc01g007080.2.1 Tomato peroxisome 22.14 24.42
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 9.73 22.57
Solyc01g007090.1.1 Tomato cytosol 23.47 19.77
Protein Annotations
MapMan:24.3.11InterPro:ALMTncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0008150
GO:GO:0009705GO:GO:0015140GO:GO:0015743GO:GO:0016020GO:GO:0016021GO:GO:0071423
UniProt:K4BXD3PFAM:PF11744PANTHER:PTHR31086PANTHER:PTHR31086:SF18EnsemblPlantsGene:Solyc05g009590.2EnsemblPlants:Solyc05g009590.2.1
TMHMM:TMhelixUniParc:UPI0002766A7BSEG:seg:::
Description
No Description!
Coordinates
chr5:+:3794973..3798690
Molecular Weight (calculated)
59756.7 Da
IEP (calculated)
6.914
GRAVY (calculated)
0.006
Length
524 amino acids
Sequence
(BLAST)
001: MVMYIKKFFK KDSSSYNKEK LLLHDEKRNG CCIYFNNIQD FAKKAIEMGK NDPRKIIFSL KMGFALFFVS LLIFWKEPFP EIAQFSIWAI LTVLIMFEFT
101: IGGTLIKGFN RGLGTLFAGM LAFIFAQLAL CAGEWEKVVW VFSIFIVAFC GTYLKLYPTM APYEYGYRVF ILTYCILIMA GNRTGGYNVA ILTRLALIAL
201: GACICLIINI GICPIWAGED LHRLVVKNFM DLATSLEGCI DGYLNCVECD ESTNHSNYNG YKSVIESTTR EQTLLGFAIW EPPHGRYKMH KNPWRDFVKL
301: SSELRHCAFM VMALHGCIQS KIQAPPDKRK VFQNELKRVG IDATNVLREL GTKLHKMEAL NSHENILKEV HETAQNLQKK IDNKSYLLVN SKNWEIGKPN
401: INFDDSSNYE NGSSENLPLN FQSLSETAID IRDLHTPQYP KDELVTKSML FNKQNHWPSC LSILDGEEID TIDEIETYLS ASALSLATFA SLLIEFVARL
501: QNVVDCFEEL SQRAEFKEPI SVKS
Best Arabidopsis Sequence Match ( AT3G18440.1 )
(BLAST)
001: MAAKQGSFRH GILEKRERLL SNNGFSDFRF TDIESNDLLE NENCGRRTRL CCCCSCGNLS EKISGVYDDA KDVARKAWEM GVSDPRKIVF SAKIGLALTI
101: VALLIFYQEP NPDLSRYSVW AILTVVVVFE FTIGATLSKG FNRALGTLSA GGLALGMAEL STLFGDWEEI FCTLSIFCIG FLATFMKLYP SMKAYEYGFR
201: VFLLTYCYIL ISGFRTGQFI EVAISRFLLI ALGAGVSLGV NMFIYPIWAG EDLHNLVVKN FMNVATSLEG CVNGYLRCLE YERIPSKILT YQASEDPVYK
301: GYRSAVESTS QEESLMSFAI WEPPHGPYKS FNYPWKNYVK LSGALKHCAF TVMALHGCIL SEIQAPEERR QVFRQELQRV GVEGAKLLRE LGEKVKKMEK
401: LGPVDLLFEV HLAAEELQHK IDKKSYLLVN SECWEIGNRA TKESEPQELL SLEDSDPPEN HAPPIYAFKS LSEAVLEIPP SWGEKNHREA LNHRPTFSKQ
501: VSWPARLVLP PHLETTNGAS PLVETTKTYE SASALSLATF ASLLIEFVAR LQNVVDAFKE LSQKANFKEP EIVTTGTDVE FSGERVGLGQ KIRRCFGM
Arabidopsis Description
ALMT9Aluminum-activated malate transporter 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS46]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.