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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 2
  • plastid 1
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
 nucleus: 25464976
msms PMID: 25464976 doi
Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400072326 Potato golgi 79.29 93.12
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 55.44 54.64
KRH68006 Soybean golgi, peroxisome, plasma membrane 53.56 52.67
KRG96263 Soybean nucleus 53.14 52.59
CDY52054 Canola cytosol, peroxisome, plasma membrane 46.44 51.15
AT3G11680.2 Thale cress plasma membrane 52.09 50.82
Bra038672.1-P Field mustard plasma membrane 51.05 49.8
Solyc01g007080.2.1 Tomato peroxisome 49.37 49.68
CDY01048 Canola cytosol, golgi, plasma membrane 50.63 49.59
CDY08504 Canola cytosol, golgi, plasma membrane 50.42 49.28
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 50.42 49.18
GSMUA_Achr6P35650_001 Banana plastid 46.23 48.79
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 42.05 47.97
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 46.65 47.75
Solyc11g071350.1.1 Tomato nucleus 40.8 43.53
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 40.17 43.05
TraesCS2B01G314100.1 Wheat plasma membrane 39.96 42.16
Zm00001d025373_P001 Maize cytosol, peroxisome, plasma membrane 38.7 42.14
Os04t0417000-01 Rice cytosol, plastid, vacuole 39.96 41.98
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 36.4 41.83
Solyc06g074100.1.1 Tomato plasma membrane 40.8 41.76
OQU81544 Sorghum peroxisome 38.91 41.33
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 36.4 40.75
Zm00001d003749_P001 Maize plasma membrane 39.33 40.52
Solyc01g007090.1.1 Tomato cytosol 52.3 40.19
TraesCS2D01G295900.1 Wheat plasma membrane 39.96 39.46
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 38.91 39.16
Solyc08g082950.2.1 Tomato plasma membrane 38.28 38.45
TraesCS4D01G283600.1 Wheat plasma membrane 37.45 38.41
Solyc01g096140.2.1 Tomato cytosol, peroxisome, plasma membrane 38.91 37.35
Solyc09g065070.1.1 Tomato peroxisome 30.96 34.18
OQU75600 Sorghum cytosol 14.64 34.15
Solyc08g006990.1.1 Tomato cytosol, peroxisome, plasma membrane 34.52 31.02
Solyc06g061100.2.1 Tomato plasma membrane 32.64 29.89
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 9.62 28.05
Solyc05g009590.2.1 Tomato plasma membrane 27.2 24.81
Solyc05g009580.2.1 Tomato cytosol 27.82 24.63
Solyc03g119640.2.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 29.5 23.15
Solyc03g096820.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 27.2 22.77
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 16.53 20.47
Protein Annotations
MapMan:24.3.11InterPro:ALMTGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0008150GO:GO:0009705
GO:GO:0015140GO:GO:0015743GO:GO:0016020GO:GO:0016021GO:GO:0071423UniProt:K4D375
PFAM:PF11744PANTHER:PTHR31086PANTHER:PTHR31086:SF3EnsemblPlantsGene:Solyc10g081890.1EnsemblPlants:Solyc10g081890.1.1TMHMM:TMhelix
UniParc:UPI0002769C04SEG:seg::::
Description
No Description!
Coordinates
chr10:+:62828092..62831466
Molecular Weight (calculated)
52887.4 Da
IEP (calculated)
7.131
GRAVY (calculated)
0.128
Length
478 amino acids
Sequence
(BLAST)
001: MDFPKKMKEK IVEIVKKTMK IGKDDPRKIW HAFKVGLALT LISLFYYYRP LYDGFGQSAI WAVLTVVVVF EFTAGATLCK CLNRGFATLT AGALGVGAKY
101: FADLFGKEGE PIVLGILVFT LGALGTFTRF FPHMKRRYDY GILIFVLTFS MVTVSGYRVD KILELAHQRL STILIGAATC MIVSLIVCPV WAGEDLHKLI
201: YTHLEKLANF LEGFGNEYFI NSENDEIVKP SNEGFLGAYK TVLNSKATEE ALANFAWWEP GHGSFRLRHP WKQYLKIGVL ARECACHLQA LSGYFNSKPQ
301: VPSEFQKEIE EACTKMCIES SKVLKELAFS IKTMTQPSSS AAEIHLCHSK TAVDDFKSIL TTTETLLISN KLDLLEIFPA ITVASVLIDV INCVEKMSES
401: VEDLSVQAHF KKAKNEEFSS SSPEKPPPQQ HQLLHRGIVK PVVDVDDAGG SDFVAIEICG GGEAAAGKAE VNPVVVKS
Best Arabidopsis Sequence Match ( AT3G11680.2 )
(BLAST)
001: MEMDLNAQEK KAGFFQRLQD FPSKLKDDVT KRVKNVQKFA KDDPRRIIHS MKVGVALTLV SLLYYVRPLY ISFGVTGMWA ILTVVVVFEF TVGGTLSKGL
101: NRGFATLIAG ALGVGAVHLA RFFGHQGEPI VLGILVFSLG AAATFSRFFP RIKQRYDYGA LIFILTFSFV AISGYRTDEI LIMAYQRLST ILIGGTICIL
201: VSIFICPVWA GEDLHKMIAN NINKLAKYLE GFEGEYFQPE KISKETSSCV REYKSILTSK STEDSLANLA RWEPGHGRFR LRHPWKKYLK IAGLVRQCAV
301: HLEILNGYVL SNDKAPQEFE SKIQEPITTM SREVGEALKA IAKSIKTMRN DSACVNAHID NSKKAIKNLK IALKSSYPET YKDLLEIIPG VTMASILIEV
401: VNCVEKIYEA VEEFSGLAHF KETLDSKLSA EIGQHQLLHR GCVKPVLDGD NEKEDNSSCH VLITVHDEGY LPTATAKNVL GAEKTRVDIV
Arabidopsis Description
Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.