Factsheet for PGSC0003DMT400072326

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 1
mitochondrion 1
golgi 4
plastid 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g081890.1.1	Tomato	nucleus	93.12	79.29
PGSC0003DMT400085620	Potato	endoplasmic reticulum, plasma membrane, vacuole	37.59	49.35
PGSC0003DMT400089827	Potato	endoplasmic reticulum, golgi	46.93	46.59
VIT_08s0105g00250.t01	Wine grape	cytosol, golgi, plasma membrane	54.05	45.36
KRG96263	Soybean	nucleus	52.33	44.1
KRH68006	Soybean	golgi, peroxisome, plasma membrane	52.33	43.83
CDY52054	Canola	cytosol, peroxisome, plasma membrane	44.47	41.71
AT3G11680.2	Thale cress	plasma membrane	50.12	41.63
Bra038672.1-P	Field mustard	plasma membrane	49.39	41.02
CDY01048	Canola	cytosol, golgi, plasma membrane	48.65	40.57
CDY08504	Canola	cytosol, golgi, plasma membrane	48.4	40.29
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	48.4	40.2
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	40.79	39.62
GSMUA_Achr6P35650_001	Banana	plastid	43.98	39.51
PGSC0003DMT400000350	Potato	endoplasmic reticulum, golgi	33.42	37.57
PGSC0003DMT400050498	Potato	cytosol, peroxisome, plasma membrane	39.56	36.84
PGSC0003DMT400047767	Potato	plasma membrane	37.59	35.83
OQU75600	Sorghum	cytosol	17.94	35.61
TraesCS2B01G314100.1	Wheat	plasma membrane	39.31	35.32
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	37.84	34.53
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.14	34.38
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	36.85	34.17
Os04t0417000-01	Rice	cytosol, plastid, vacuole	38.08	34.07
PGSC0003DMT400087967	Potato	cytosol	55.04	33.68
OQU81544	Sorghum	peroxisome	37.1	33.56
TraesCS2D01G295900.1	Wheat	plasma membrane	39.31	33.06
PGSC0003DMT400075167	Potato	golgi	22.85	32.86
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	38.33	32.84
Zm00001d003749_P001	Maize	plasma membrane	37.35	32.76
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	34.15	32.55
PGSC0003DMT400086999	Potato	cytosol, endoplasmic reticulum, plasma membrane	52.83	32.33
TraesCS4D01G283600.1	Wheat	plasma membrane	36.36	31.76
PGSC0003DMT400052884	Potato	cytosol	31.7	23.98
PGSC0003DMT400033766	Potato	cytosol	24.57	18.62
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	27.03	18.21
PGSC0003DMT400069527	Potato	plasma membrane	24.32	17.62
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	24.57	17.51
PGSC0003DMT400005384	Potato	plasma membrane	27.76	16.94

Protein Annotations

EnsemblPlants:PGSC0003DMT400072326	EnsemblPlantsGene:PGSC0003DMG400028146	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015743
GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF3	PFAM:PF11744
PGSC:PGSC0003DMG400028146	SEG:seg	TMHMM:TMhelix	UniParc:UPI000296FA94	UniProt:M1CQ33	MapMan:24.3.11

Description

Aluminum-activated malate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400028146]

Coordinates

chr10:-:56153038..56158405

Molecular Weight (calculated)

44611.1 Da

IEP (calculated)

7.541

GRAVY (calculated)

0.117

Length

407 amino acids

Sequence
(BLAST)

001: MNKSATLSKC LNRGFATLTA GALGVGAKYF ADLFGKEGEP IVLGILVFTL GALGTFTRFF PHMKRRYDYG ILIFVLTFSM VTVSGYRVDK ILELAHQRLS
101: TILIGAATCM IVSLIVCPVW AGEDLHKLIY THLEKLANFL EGFGSEYFIF SENDEIVKAS NEGFLGSYKT VLNSKANEEA LANFAWWEPG HGSFRLRHPW
201: KQYLKIGVLA RECACHLQAL SGYFNSKPQV PSEFQKKIEE ACTKMCIESS KVLKELAFSI KTMTQPSSSA AEIHLRHSKA AVDDFKSILA ATETLLLSNK
301: LDLLEIFPAI TVASVLIDVI NCIDKISESV EDLSVQAHFK KAKNKEFSSS SPEKPPPQHQ LLHRGIVKPV VDVDDVDSGG DFVAIEICGG GAAVAGKAEV
401: NPAVVKK

Best Arabidopsis Sequence Match ( AT3G11680.2 )
(BLAST)

001: MEMDLNAQEK KAGFFQRLQD FPSKLKDDVT KRVKNVQKFA KDDPRRIIHS MKVGVALTLV SLLYYVRPLY ISFGVTGMWA ILTVVVVFEF TVGGTLSKGL
101: NRGFATLIAG ALGVGAVHLA RFFGHQGEPI VLGILVFSLG AAATFSRFFP RIKQRYDYGA LIFILTFSFV AISGYRTDEI LIMAYQRLST ILIGGTICIL
201: VSIFICPVWA GEDLHKMIAN NINKLAKYLE GFEGEYFQPE KISKETSSCV REYKSILTSK STEDSLANLA RWEPGHGRFR LRHPWKKYLK IAGLVRQCAV
301: HLEILNGYVL SNDKAPQEFE SKIQEPITTM SREVGEALKA IAKSIKTMRN DSACVNAHID NSKKAIKNLK IALKSSYPET YKDLLEIIPG VTMASILIEV
401: VNCVEKIYEA VEEFSGLAHF KETLDSKLSA EIGQHQLLHR GCVKPVLDGD NEKEDNSSCH VLITVHDEGY LPTATAKNVL GAEKTRVDIV

Arabidopsis Description

Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.