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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 72.78 71.63
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 22.42 59.43
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 54.27 57.77
KRH70564 Soybean mitochondrion 56.58 57.71
KRH75405 Soybean mitochondrion 56.76 57.58
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 56.76 57.17
KRG90790 Soybean cytosol 56.05 56.96
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 55.52 56.93
KRH35972 Soybean cytosol, peroxisome, plasma membrane 55.87 55.97
CDY42102 Canola peroxisome 54.27 55.86
AT1G68600.1 Thale cress cytosol, golgi, plasma membrane 53.2 55.68
CDX84992 Canola peroxisome 54.09 55.68
CDY36105 Canola cytosol, peroxisome, plasma membrane 56.05 55.26
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 56.23 54.67
Bra024742.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 54.98 54.5
CDY24400 Canola cytosol, peroxisome, plasma membrane 56.05 54.4
GSMUA_Achr10P... Banana plasma membrane 51.96 54.38
CDY24338 Canola plasma membrane 34.88 54.29
OQU85465 Sorghum golgi 48.93 53.09
Bra002062.1-P Field mustard cytosol, peroxisome, plasma membrane 52.14 52.41
AT2G17470.2 Thale cress cytosol 51.25 51.43
AT3G18440.1 Thale cress plasma membrane 54.63 51.34
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 35.23 51.03
AT1G18420.1 Thale cress mitochondrion 52.31 50.6
CDY19211 Canola mitochondrion 50.71 50.53
Zm00001d010130_P001 Maize cytosol 17.44 50.52
CDY26161 Canola mitochondrion 49.82 50.0
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 50.0 49.56
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 53.2 49.5
Bra025906.1-P Field mustard mitochondrion 51.07 49.4
PGSC0003DMT400033766 Potato cytosol 46.26 48.42
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 50.18 48.04
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 50.0 47.79
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 49.82 47.62
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 47.69 45.89
Zm00001d017928_P001 Maize plasma membrane 48.58 45.88
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 46.98 45.44
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 46.98 45.36
Zm00001d045696_P001 Maize mitochondrion, plastid 49.47 45.2
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 46.62 45.09
EER89585 Sorghum plastid 49.29 44.97
CDY18521 Canola plasma membrane 53.2 44.96
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 46.26 44.67
CDX81872 Canola peroxisome, plastid, vacuole 22.6 43.94
HORVU6Hr1G072900.3 Barley peroxisome 47.51 43.41
TraesCS6B01G321600.1 Wheat plasma membrane 47.15 40.09
Zm00001d044350_P001 Maize mitochondrion 14.41 38.57
VIT_01s0011g03290.t01 Wine grape plasma membrane 61.03 30.38
PGSC0003DMT400047767 Potato plasma membrane 22.42 29.51
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 22.6 29.06
PGSC0003DMT400052884 Potato cytosol 27.4 28.62
PGSC0003DMT400075167 Potato golgi 14.41 28.62
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 13.52 24.52
PGSC0003DMT400072326 Potato golgi 17.62 24.32
PGSC0003DMT400000350 Potato endoplasmic reticulum, golgi 15.48 24.03
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 17.08 23.41
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 53.2 23.09
Bra037581.1-P Field mustard golgi, mitochondrion, nucleus, plasma membrane 53.2 22.6
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 23.67 20.0
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 8.01 19.91
PGSC0003DMT400087967 Potato cytosol 22.78 19.25
PGSC0003DMT400005384 Potato plasma membrane 20.11 16.94
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400069527EnsemblPlantsGene:PGSC0003DMG400027029EntrezGene:102599908GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF20
PFAM:PF11744PGSC:PGSC0003DMG400027029RefSeq:XP_006347472.1SEG:segTMHMM:TMhelixUniParc:UPI000295EC31
UniProt:M1CKL6MapMan:24.3.11::::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400027029]
Coordinates
chr6:+:53551085..53554883
Molecular Weight (calculated)
62853.0 Da
IEP (calculated)
6.646
GRAVY (calculated)
0.038
Length
562 amino acids
Sequence
(BLAST)
001: MAAPLSQNFN ETSKERLIPK YSEYGLDPSF YVEREGFWRR LCNRIKKSCS NVKHGSIKAI DMGRKDPRKV IFAAKMGLAL SLVSVIIFFK EPLSYIGTYS
101: IWAILTVVVV FEFSIGATLS KGFNRALGTL SAAGLAVGIA ELSVMAGEWQ EVVIVVSIFV SGFLATYLKL YPAMKQYEYG FRVFLLTYCI VLVSGTSHFF
201: HAAVSRLLLI GVGAGVCLLI NVGLYPIWAG EDLHKLVVKN FKRVSTSLEG CVNGYLQCLE YDRIPSKILV YQASDDPVYS GYRATLESTS QEDSLLTFAE
301: WEPPHGRYKM FNYPWADYVK VSGALRHCAF MVMAMHSCIL SEIQAASDLR QIFCKEIQRV GIEGAKVLQH LGDKVEKMEK LSPRDLLEEV HEAAEDLQLL
401: IDQKSYLLVQ VENWENAKQA NQFEDPEHIQ ELKDNEPKGI GINSLSEAGL NLRSAHTLKH MDTYNRNSSM NISAAQMSSS GNVFNQMVWP SRLSILGDVI
501: LNEREVRTFE SACPLSLSTF TSLLIEFVAR LQNLVNAFQQ LSEKAKFKEP VDAAGAEEAA NL
Best Arabidopsis Sequence Match ( AT3G18440.1 )
(BLAST)
001: MAAKQGSFRH GILEKRERLL SNNGFSDFRF TDIESNDLLE NENCGRRTRL CCCCSCGNLS EKISGVYDDA KDVARKAWEM GVSDPRKIVF SAKIGLALTI
101: VALLIFYQEP NPDLSRYSVW AILTVVVVFE FTIGATLSKG FNRALGTLSA GGLALGMAEL STLFGDWEEI FCTLSIFCIG FLATFMKLYP SMKAYEYGFR
201: VFLLTYCYIL ISGFRTGQFI EVAISRFLLI ALGAGVSLGV NMFIYPIWAG EDLHNLVVKN FMNVATSLEG CVNGYLRCLE YERIPSKILT YQASEDPVYK
301: GYRSAVESTS QEESLMSFAI WEPPHGPYKS FNYPWKNYVK LSGALKHCAF TVMALHGCIL SEIQAPEERR QVFRQELQRV GVEGAKLLRE LGEKVKKMEK
401: LGPVDLLFEV HLAAEELQHK IDKKSYLLVN SECWEIGNRA TKESEPQELL SLEDSDPPEN HAPPIYAFKS LSEAVLEIPP SWGEKNHREA LNHRPTFSKQ
501: VSWPARLVLP PHLETTNGAS PLVETTKTYE SASALSLATF ASLLIEFVAR LQNVVDAFKE LSQKANFKEP EIVTTGTDVE FSGERVGLGQ KIRRCFGM
Arabidopsis Description
ALMT9Aluminum-activated malate transporter 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS46]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.