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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42102 Canola peroxisome 98.53 98.53
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 86.81 86.5
CDY36105 Canola cytosol, peroxisome, plasma membrane 88.83 85.09
CDY24400 Canola cytosol, peroxisome, plasma membrane 89.74 84.63
CDY24338 Canola plasma membrane 46.15 69.81
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 24.36 62.74
KRH75405 Soybean mitochondrion 61.17 60.29
KRG90790 Soybean cytosol 60.99 60.22
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 60.81 59.5
KRH70564 Soybean mitochondrion 59.89 59.35
KRH35972 Soybean cytosol, peroxisome, plasma membrane 60.07 58.47
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 41.03 58.03
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 54.58 56.44
GSMUA_Achr10P... Banana plasma membrane 54.21 55.12
PGSC0003DMT400069527 Potato plasma membrane 55.68 54.09
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 56.04 53.59
KRH60327 Soybean cytosol, golgi, plasma membrane 55.49 52.6
OQU85465 Sorghum golgi 49.63 52.32
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.68 51.7
KRH39212 Soybean mitochondrion 55.49 50.67
KRH48465 Soybean mitochondrion 55.13 50.5
KRH60330 Soybean plasma membrane 35.71 50.39
KRH41621 Soybean golgi, peroxisome, plasma membrane 52.56 49.83
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 51.28 49.38
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 34.8 48.97
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.56 48.81
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.2 48.47
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 52.01 48.38
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 52.75 47.68
CDY26161 Canola mitochondrion 48.9 47.68
Zm00001d010130_P001 Maize cytosol 16.85 47.42
CDY19211 Canola mitochondrion 48.9 47.34
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 14.1 46.95
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 49.45 46.23
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 48.9 45.96
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 48.72 45.78
Zm00001d017928_P001 Maize plasma membrane 49.82 45.71
PGSC0003DMT400033766 Potato cytosol 44.87 45.62
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 48.35 45.36
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 48.35 45.36
Zm00001d045696_P001 Maize mitochondrion, plastid 50.55 44.88
CDY18521 Canola plasma membrane 54.03 44.36
EER89585 Sorghum plastid 50.0 44.32
HORVU6Hr1G072900.3 Barley peroxisome 47.8 42.44
CDX81872 Canola peroxisome, plastid, vacuole 21.79 41.18
TraesCS6B01G321600.1 Wheat plasma membrane 47.07 38.88
CDX97484 Canola plasma membrane 8.61 34.56
Zm00001d044350_P001 Maize mitochondrion 13.19 34.29
CDX87698 Canola plasma membrane 17.4 31.77
VIT_01s0011g03290.t01 Wine grape plasma membrane 65.57 31.71
CDY52054 Canola cytosol, peroxisome, plasma membrane 24.54 30.88
CDY51721 Canola plasma membrane 25.09 29.09
CDX90432 Canola cytosol 27.84 28.95
CDY01507 Canola cytosol 27.47 28.68
CDX77675 Canola cytosol, golgi, plasma membrane 28.21 28.41
CDY07155 Canola cytosol, peroxisome, plasma membrane 24.36 28.36
CDY63048 Canola plasma membrane 28.57 28.31
CDX74373 Canola plasma membrane 24.36 27.88
CDY01945 Canola plasma membrane 24.18 27.67
CDY01943 Canola plasma membrane 24.18 27.67
CDY01048 Canola cytosol, golgi, plasma membrane 24.73 27.66
CDY08504 Canola cytosol, golgi, plasma membrane 24.73 27.61
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 27.29 27.59
CDX97239 Canola plasma membrane 24.18 27.27
CDX91864 Canola plasma membrane 24.54 26.53
CDX97483 Canola plasma membrane 22.89 26.43
CDY31146 Canola cytosol, golgi, plasma membrane 22.89 25.1
CDX95060 Canola cytosol, golgi, plasma membrane 23.26 25.0
CDX93562 Canola cytosol, golgi, plasma membrane 23.08 24.8
CDY31147 Canola plasma membrane 22.34 24.75
CDX97489 Canola cytosol, golgi, plasma membrane 22.89 24.65
CDX77103 Canola golgi 22.89 24.46
CDY30563 Canola plasma membrane 22.71 24.27
CDX97487 Canola plasma membrane 16.48 23.32
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 53.85 22.7
CDX87700 Canola cytosol 10.44 21.43
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 12.09 20.56
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 8.42 20.35
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
CDX97488 Canola endoplasmic reticulum 0.0 0.0
Protein Annotations
EnsemblPlants:CDX84992EnsemblPlantsGene:GSBRNA2T00142403001GO:A0A078D735GO:GO:0006810GO:GO:0008150GO:GO:0015743
InterPro:ALMTncoils:CoilPANTHER:PTHR31086PANTHER:PTHR31086:SF20PFAM:PF11744ProteinID:CDX84992
ProteinID:CDX84992.1SEG:segTMHMM:TMhelixUniParc:UPI0004EDADF1MapMan:24.3.11:
Description
BnaC05g20630D
Coordinates
chrLK031839:+:1248521..1251957
Molecular Weight (calculated)
61624.9 Da
IEP (calculated)
7.003
GRAVY (calculated)
-0.075
Length
546 amino acids
Sequence
(BLAST)
001: MFGDHTRESL LSRKGCSDFG FNDSGIISDD RRSKWRLYEM GRSDRRKVYF AVKMGVALAL CSFVIYLKEP LHDASKYAVW AILTVVVVFE YSIGATLVKG
101: FNRAIGTLSA GGLALGIARL SVLAGRFEEE IIIVSIFLAG LCASYLKLYP AMKSYEYAFR VFLLTFCIVL VSGNNSRDFF STAYYRFLLI CVGACICLGV
201: NIFILPIWSG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV WEPPHGPYRT FHHPWANYVK
301: LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRHELQRV GNEGAKVLRL FAEKVEKMEK LSLGNIIKDV QRAAEELQMK IDKNSFLLVN SESWAAMKEK
401: ADAEEAQENY HESKDDETKV FQTLSQIWDT NTNHHQNPHN GNDSHLWIST ESMMLRNREQ WPSVSFIGGN MINEIESKVY ESASSLSLAT FASLLIEFVA
501: RLQNVVNAFE ELSTKAGFEE PVTETQKKID KAGFWTRLSS CFSSRA
Best Arabidopsis Sequence Match ( AT1G25480.1 )
(BLAST)
001: MADQTREAFL SRKACSDFGF NDSNIIDDRR SKFRCFRFCS DGITASWKAL YDIGAKLYEM GRSDRRKVYF SVKMGMALAL CSFVIYLKEP LRDASKYAVW
101: AILTVVVVFE YSIGATLVKG FNRAIGTLSA GGLALGIARL SVSAGEFEEL IIIISIFIAG FSASYLKLYP AMKSYEYAFR VFLLTYCIVL VSGNNSRDFF
201: STAYYRFLLI LVGAGICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV
301: WEPPHGPYKT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSPGNVLKDV QRAAEELQMK
401: IDSNSFLLVN SESWAAMKEK AEAEEAQQNY HEAKDDESKV IQSLSQIWDN NNNPHHQNQH AGNDSQLWIS TESMMLRNRE NWPSVSFIGG SMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNIVNAY EELSTKADFK EQVSETRI
Arabidopsis Description
ALMT4Aluminum-activated malate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.