CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51721	Canola	plasma membrane	95.95	95.54
CDX74373	Canola	plasma membrane	85.71	84.28
CDY01945	Canola	plasma membrane	84.44	83.02
CDY01943	Canola	plasma membrane	84.22	82.81
CDX97239	Canola	plasma membrane	85.29	82.64
AT4G00910.1	Thale cress	plasma membrane	85.07	82.27
CDX91864	Canola	plasma membrane	86.35	80.2
VIT_15s0046g00130.t01	Wine grape	plasma membrane	54.8	52.02
Solyc01g096140.2.1	Tomato	cytosol, peroxisome, plasma membrane	52.67	49.6
CDX97484	Canola	plasma membrane	13.65	47.06
PGSC0003DMT400000350	Potato	endoplasmic reticulum, golgi	35.61	46.13
Zm00001d017570_P001	Maize	cytosol, peroxisome, plasma membrane	47.97	46.01
GSMUA_AchrUn_...	Banana	cytosol	44.56	45.04
EES05741	Sorghum	cytosol	47.97	45.0
Zm00001d017571_P001	Maize	peroxisome	46.7	44.88
TraesCS6D01G236500.1	Wheat	plasma membrane	46.48	44.86
GSMUA_Achr2P09980_001	Banana	cytosol	41.79	44.75
TraesCS6A01G255200.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	46.27	44.65
GSMUA_Achr9P00890_001	Banana	cytosol, peroxisome, plasma membrane	43.71	44.37
HORVU2Hr1G095430.2	Barley	plasma membrane	11.51	44.26
TraesCS2B01G420600.1	Wheat	cytosol	44.78	44.03
TraesCS6B01G270300.1	Wheat	cytosol, nucleus, peroxisome	45.63	43.85
Os02t0673100-02	Rice	cytosol	47.33	43.44
Os04t0567200-01	Rice	plasma membrane	45.63	41.72
TraesCS2A01G402400.2	Wheat	cytosol	44.78	41.58
TraesCS2D01G399700.2	Wheat	cytosol	44.56	41.39
EES12682	Sorghum	cytosol	43.28	41.18
Zm00001d026102_P001	Maize	plasma membrane	43.28	40.12
CDY52054	Canola	cytosol, peroxisome, plasma membrane	35.39	38.25
CDY31146	Canola	cytosol, golgi, plasma membrane	37.53	35.34
CDX97489	Canola	cytosol, golgi, plasma membrane	37.53	34.71
CDX97483	Canola	plasma membrane	34.97	34.67
CDY08504	Canola	cytosol, golgi, plasma membrane	35.61	34.15
CDX95060	Canola	cytosol, golgi, plasma membrane	36.89	34.06
CDY01048	Canola	cytosol, golgi, plasma membrane	35.39	34.02
CDX93562	Canola	cytosol, golgi, plasma membrane	36.67	33.86
CDX87698	Canola	plasma membrane	21.32	33.44
CDY31147	Canola	plasma membrane	34.54	32.86
CDX97487	Canola	plasma membrane	25.8	31.35
CDX77103	Canola	golgi	34.12	31.31
CDY30563	Canola	plasma membrane	34.12	31.31
HORVU7Hr1G081320.3	Barley	peroxisome	42.22	30.32
Os06t0331900-01	Rice	cytosol, peroxisome, plasma membrane	42.86	30.09
CDY01507	Canola	cytosol	33.26	29.83
CDX90432	Canola	cytosol	33.26	29.71
TraesCS7B01G241400.1	Wheat	peroxisome	42.0	29.49
TraesCS7D01G338100.1	Wheat	peroxisome	41.79	29.47
EER89808	Sorghum	cytosol, endoplasmic reticulum, peroxisome, plastid	42.22	29.42
Zm00001d046029_P001	Maize	plastid	41.79	29.08
TraesCS7A01G341500.1	Wheat	cytosol, peroxisome, plasma membrane	41.15	29.02
CDX77675	Canola	cytosol, golgi, plasma membrane	33.48	28.97
CDY63048	Canola	plasma membrane	33.48	28.49
CDX97485	Canola	endoplasmic reticulum, extracellular, plasma membrane	18.98	27.73
CDY24338	Canola	plasma membrane	21.11	27.42
CDY59584	Canola	cytosol, endoplasmic reticulum, plasma membrane	31.56	27.41
CDY42102	Canola	peroxisome	28.78	24.73
CDY36105	Canola	cytosol, peroxisome, plasma membrane	29.85	24.56
CDX84992	Canola	peroxisome	28.36	24.36
CDY24400	Canola	cytosol, peroxisome, plasma membrane	30.06	24.35
CDY26161	Canola	mitochondrion	29.0	24.29
CDY19211	Canola	mitochondrion	28.78	23.94
CDX81872	Canola	peroxisome, plastid, vacuole	14.07	22.84
CDY18521	Canola	plasma membrane	28.57	20.15
CDX87700	Canola	cytosol	10.45	18.42
CDX95521	Canola	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	28.36	10.27
CDX97488	Canola	endoplasmic reticulum	0.0	0.0
CDY18522	Canola	cytosol, golgi, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY07155	EnsemblPlantsGene:GSBRNA2T00123510001	GO:A0A078EYH7	GO:GO:0006810	GO:GO:0008150	GO:GO:0015743
InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF4	PFAM:PF11744	ProteinID:CDY07155	ProteinID:CDY07155.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EBB2F8	MapMan:24.3.11	:	:

Description

BnaCnng01700D

Coordinates

chrLK031975:-:557154..559058

Molecular Weight (calculated)

52289.4 Da

IEP (calculated)

8.045

GRAVY (calculated)

0.032

Length

469 amino acids

Sequence
(BLAST)

001: MASKVEAGKL EWRISVDNET TKRLVPKSGP SERIFIWLKG LITKTWRIGA DDPAKVVHCL KVGLALSLVC IFYYMRPLYD GVGGNAMWAI MTVVVVFESN
101: VGATFSKCVN RVVATILAGS LGIAVHWVAT QSGEAEIFVI GSSVFLFAFA ATYSRFVPSF KSRFDYGAMI FILTFSLVSV GGYRVDKLVD MAQQRVSTIA
201: VGTSICIIIT IFICPIWAGT QLHRLVQHNF IKLADSLDGC VAEYFKKRDV STNENEYETN TKVQGFKCVL NPKGTEEAMA NLARWEPAHG SFNFRHPWQQ
301: YVKIGAAMRR CAYCLENLSI CMNYETEVPD QVKKHFREAC MKLSAASSKI MRELADILKN TRRSSKMDFL VFDMNSAVQE LQETLKTIPI QTNKPEEEEE
401: VPSAEDRTIP MTLHEVLPVA TLVSLLIENA ARIQTTVEAV DVLASLADFK QDSKKKTGDN NTNQPPLSS

Best Arabidopsis Sequence Match ( AT1G08430.1 )
(BLAST)

001: MEKVREIVRE GIRVGNEDPR RIIHAFKVGL ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLGKGLNR GVATLVAGGL GIGAHQLARL
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ

Arabidopsis Description

ALMT1Aluminum-activated malate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.