Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31147 | Canola | plasma membrane | 100.0 | 2.84 |
| CDX97483 | Canola | plasma membrane | 92.86 | 2.75 |
| AT1G08430.1 | Thale cress | golgi | 21.43 | 0.61 |
| CDY31146 | Canola | cytosol, golgi, plasma membrane | 21.43 | 0.6 |
| CDX93562 | Canola | cytosol, golgi, plasma membrane | 14.29 | 0.39 |
| CDX95060 | Canola | cytosol, golgi, plasma membrane | 14.29 | 0.39 |
| CDY30563 | Canola | plasma membrane | 14.29 | 0.39 |
| CDX77103 | Canola | golgi | 14.29 | 0.39 |
| VIT_06s0009g00450.t01 | Wine grape | plasma membrane | 7.14 | 0.21 |
| CDX97489 | Canola | cytosol, golgi, plasma membrane | 7.14 | 0.2 |
| CDY42102 | Canola | peroxisome | 0.0 | 0.0 |
| CDY51721 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY52054 | Canola | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| OQU75600 | Sorghum | cytosol | 0.0 | 0.0 |
| CDY59584 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| CDY63048 | Canola | plasma membrane | 0.0 | 0.0 |
| GSMUA_Achr6P35650_001 | Banana | plastid | 0.0 | 0.0 |
| GSMUA_Achr8P30390_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| HORVU2Hr1G073840.3 | Barley | peroxisome, plasma membrane | 0.0 | 0.0 |
| KRH25315 | Soybean | plasma membrane | 0.0 | 0.0 |
| KRH30357 | Soybean | plasma membrane | 0.0 | 0.0 |
| KXG26278 | Sorghum | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| CDY24400 | Canola | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| OQU81543 | Sorghum | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| OQU81544 | Sorghum | peroxisome | 0.0 | 0.0 |
| Os04t0417000-01 | Rice | cytosol, plastid, vacuole | 0.0 | 0.0 |
| PGSC0003DMT400050498 | Potato | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| Solyc11g068970.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| TraesCS2A01G297900.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 0.0 | 0.0 |
| TraesCS2B01G314100.1 | Wheat | plasma membrane | 0.0 | 0.0 |
| TraesCS2D01G295900.1 | Wheat | plasma membrane | 0.0 | 0.0 |
| TraesCS4D01G283600.1 | Wheat | plasma membrane | 0.0 | 0.0 |
| Zm00001d003749_P001 | Maize | plasma membrane | 0.0 | 0.0 |
| Zm00001d025373_P001 | Maize | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| CDX97487 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX74373 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX77675 | Canola | cytosol, golgi, plasma membrane | 0.0 | 0.0 |
| CDX81872 | Canola | peroxisome, plastid, vacuole | 0.0 | 0.0 |
| CDX84992 | Canola | peroxisome | 0.0 | 0.0 |
| CDX87698 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX87700 | Canola | cytosol | 0.0 | 0.0 |
| CDX90432 | Canola | cytosol | 0.0 | 0.0 |
| CDX91864 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX95521 | Canola | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 0.0 | 0.0 |
| CDX97239 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX97484 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX97485 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 0.0 | 0.0 |
| CDY36105 | Canola | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| CDY01048 | Canola | cytosol, golgi, plasma membrane | 0.0 | 0.0 |
| CDY01507 | Canola | cytosol | 0.0 | 0.0 |
| CDY01943 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY01945 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY07155 | Canola | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| CDY08504 | Canola | cytosol, golgi, plasma membrane | 0.0 | 0.0 |
| CDY18521 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY18522 | Canola | cytosol, golgi, nucleus, plastid | 0.0 | 0.0 |
| CDY19211 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY24338 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY26161 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX97488 | EnsemblPlantsGene:GSBRNA2T00104681001 | ProteinID:CDX97488 | ProteinID:CDX97488.1 | UniParc:UPI0004EDDEEA | MapMan:35.2 |
Description
BnaC08g13530D
Coordinates
chrLK031899:+:1230070..1230114
Molecular Weight (calculated)
1640.2 Da
IEP (calculated)
7.551
GRAVY (calculated)
0.893
Length
14 amino acids
Sequence
(BLAST)
(BLAST)
1: MMLEHSLGVR ILQI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.