CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, nucleus, plasma membrane

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18522	Canola	cytosol, golgi, nucleus, plastid	52.97	99.42
AT3G18440.1	Thale cress	plasma membrane	40.93	88.63
CDY18521	Canola	plasma membrane	43.47	84.66
VIT_17s0000g03850.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	28.57	62.93
KRH60327	Soybean	cytosol, golgi, plasma membrane	27.57	61.98
GSMUA_Achr7P18770_001	Banana	golgi, peroxisome, plasma membrane	24.94	61.17
KRH39212	Soybean	mitochondrion	27.72	60.03
KRH41621	Soybean	golgi, peroxisome, plasma membrane	26.49	59.55
KRH48465	Soybean	mitochondrion	27.34	59.4
GSMUA_Achr10P...	Banana	plasma membrane	24.48	59.03
KRH60330	Soybean	plasma membrane	17.53	58.66
CDY19211	Canola	mitochondrion	25.25	57.98
CDY26161	Canola	mitochondrion	24.86	57.5
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	26.25	56.29
VIT_18s0122g00020.t01	Wine grape	endoplasmic reticulum, extracellular	9.19	56.13
CDY24338	Canola	plasma membrane	15.52	55.68
OQU85465	Sorghum	golgi	22.16	55.41
Solyc06g072920.1.1	Tomato	endoplasmic reticulum, golgi	16.29	54.66
KRG90790	Soybean	cytosol	23.24	54.43
KRH75405	Soybean	mitochondrion	23.24	54.33
CDY36105	Canola	cytosol, peroxisome, plasma membrane	23.86	54.21
CDY42102	Canola	peroxisome	22.78	54.03
CDX84992	Canola	peroxisome	22.7	53.85
KRH45244	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	23.17	53.76
KRH70564	Soybean	mitochondrion	22.78	53.54
Os06t0268800-01	Rice	cytosol, plasma membrane, plastid	15.98	53.35
PGSC0003DMT400069527	Potato	plasma membrane	23.09	53.2
CDY24400	Canola	cytosol, peroxisome, plasma membrane	23.78	53.2
HORVU7Hr1G042480.1	Barley	endoplasmic reticulum, plasma membrane, plastid	23.24	53.09
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	23.4	53.06
KRH35972	Soybean	cytosol, peroxisome, plasma membrane	22.93	52.94
Zm00001d010130_P001	Maize	cytosol	7.88	52.58
TraesCS7D01G211100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	23.71	52.21
TraesCS7A01G208700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	23.71	52.21
TraesCS7B01G116000.1	Wheat	endoplasmic reticulum, plastid, vacuole	23.63	52.13
CDX81872	Canola	peroxisome, plastid, vacuole	11.43	51.21
Os02t0730600-00	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	22.93	50.86
Zm00001d017928_P001	Maize	plasma membrane	22.93	49.92
Zm00001d045696_P001	Maize	mitochondrion, plastid	23.17	48.78
EER89585	Sorghum	plastid	23.17	48.7
PGSC0003DMT400033766	Potato	cytosol	20.15	48.6
TraesCS7B01G127200.2	Wheat	cytosol, peroxisome, vacuole	21.62	48.11
TraesCS7A01G220200.1	Wheat	cytosol, peroxisome, vacuole	21.54	48.02
TraesCS7D01G221900.2	Wheat	cytosol, peroxisome, plasma membrane	21.47	47.85
HORVU7Hr1G045290.1	Barley	extracellular, peroxisome, vacuole	21.39	47.59
Solyc06g072910.2.1	Tomato	peroxisome, plasma membrane, vacuole	6.02	47.56
HORVU6Hr1G072900.3	Barley	peroxisome	21.16	44.55
TraesCS6B01G321600.1	Wheat	plasma membrane	21.31	41.75
CDX97484	Canola	plasma membrane	4.17	39.71
Zm00001d044350_P001	Maize	mitochondrion	6.25	38.57
CDX87698	Canola	plasma membrane	7.49	32.44
CDX90432	Canola	cytosol	12.51	30.86
CDY01507	Canola	cytosol	12.28	30.4
CDY52054	Canola	cytosol, peroxisome, plasma membrane	10.12	30.18
VIT_01s0011g03290.t01	Wine grape	plasma membrane	25.64	29.41
CDY01945	Canola	plasma membrane	10.81	29.35
CDY01943	Canola	plasma membrane	10.81	29.35
CDY59584	Canola	cytosol, endoplasmic reticulum, plasma membrane	12.12	29.07
CDX74373	Canola	plasma membrane	10.66	28.93
CDX97239	Canola	plasma membrane	10.73	28.72
CDY01048	Canola	cytosol, golgi, plasma membrane	10.81	28.69
CDY08504	Canola	cytosol, golgi, plasma membrane	10.81	28.63
CDY51721	Canola	plasma membrane	10.35	28.45
CDY07155	Canola	cytosol, peroxisome, plasma membrane	10.27	28.36
CDY63048	Canola	plasma membrane	12.05	28.31
CDX77675	Canola	cytosol, golgi, plasma membrane	11.81	28.23
CDX91864	Canola	plasma membrane	10.97	28.12
CDY31146	Canola	cytosol, golgi, plasma membrane	10.66	27.71
CDX97483	Canola	plasma membrane	10.12	27.7
CDX95060	Canola	cytosol, golgi, plasma membrane	10.73	27.36
CDX97489	Canola	cytosol, golgi, plasma membrane	10.66	27.22
CDX93562	Canola	cytosol, golgi, plasma membrane	10.66	27.17
CDY31147	Canola	plasma membrane	10.12	26.57
CDX97487	Canola	plasma membrane	7.64	25.65
CDY30563	Canola	plasma membrane	10.04	25.44
CDX77103	Canola	golgi	10.04	25.44
CDX87700	Canola	cytosol	5.1	24.81
CDX97485	Canola	endoplasmic reticulum, extracellular, plasma membrane	5.25	21.18
Os02t0673000-01	Rice	golgi, mitochondrion, plasma membrane	3.47	19.91
CDX97488	Canola	endoplasmic reticulum	0.0	0.0

Protein Annotations

MapMan:22.6.7.2	MapMan:24.3.11	GO:A0A078E2K2	InterPro:ALMT	InterPro:CASP_C	EnsemblPlants:CDX95521
ProteinID:CDX95521	ProteinID:CDX95521.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150	GO:GO:0015743
GO:GO:0016020	GO:GO:0030173	EnsemblPlantsGene:GSBRNA2T00101343001	PFAM:PF08172	PFAM:PF11744	PANTHER:PTHR31086
PANTHER:PTHR31086:SF20	TMHMM:TMhelix	UniParc:UPI0004EF0175	SEG:seg	:	:

Description

BnaC01g34130D

Coordinates

chrLK031889:-:958662..966266

Molecular Weight (calculated)

147749.0 Da

IEP (calculated)

5.455

GRAVY (calculated)

-0.541

Length

1295 amino acids

Sequence
(BLAST)

0001: MAAKLGSFRN GNHAEKRERL LSNNGFSDMR FGDIESNDLL EGDGHARTRL CCCCSCGDIS GKISGVYEDA KDVARKAWAM GVSDPRKIVF SAKIGLALTI
0101: VAVLIFYQEP NPDLSRYSVW AILTVVVVFE FTIGATLSKG FNRALGTLSA GGLALGMAEL STLTGDWEEL FCTVSIFCIG FIATFMKLYP AMKAYEYGFR
0201: VFLLTYCYIL ISGFRTGQFI EVAISRFLLI ALGAGVSLGV NMFIYPIWAG EDLHNLVVKN FMNVATSLEG CVNGYLHCFE YERVPSKIAT YQASEDPVYK
0301: GYRSAIESTS QEESLMSFAI WEPPHGPYRT FNYPWQNYVK LSGALKHCAF TVMALHGCIL SEIQAPEERR QVFRQELQRV GVEGARLLRE LGEKVKRMEK
0401: LGPDDMLFEV HLAAEELQHK IDKKSYLLVN SERWEIGNRS RSEPQELLSM EDLDPPENLK SPIYAFKSQS EAVLEIPKSW GEKNHREPLN HRPTFSKQVS
0501: WPARLVLPTH METTNGNYQL LETTETYESA SALSLATFAS LLIEFVARLQ TVVYAFEELS KIANFKEPEI ATSDSDVEVD GESVGLGRKI RRCFGRDQDP
0601: RTRIMEAVPD GSERDKTTPP PSSSSSSSSS PIPVVTSFWK EFDLEKEKSL LDEQGLRIAE NQENSQKNRR KLAESTRDFK KASAEDKLGM FNSLLKGYQE
0701: EVDNITKRAK FGENAFLNIY QKLYEAPDPF PALASIAEQE RKLSEVESEN RKMKVELEEF RTEATHLKNQ QSTIRRLEER NRQLEQQMEE KIKEVVEIKQ
0801: RNLAEENQKT LELLKDREQA LQDQLRQAKD SVSTMQKLHE LAQSQLFELR AQSDEEKATK QSELSLLMDE VERAQTRLLS LEREKGHLRS QLQTANEDTE
0901: NKNSDNVDSN SMLENSLTAK EKIISELNME IHNVETALAN EREDHVVEIK KLNSLLNKKD TIIEEMKKEL QERPSAKLVD DLRKKVKILQ AVGYNSIEAE
1001: DWDAATTGEE MSRMESLLLD KNRKMEHEVT QLKVQLSEKT SLLEKAEAKG EELTAKVNEQ QRLIQKLEDD ILKGYSSKER KGALFNEWEF SEAGVTEQSE
1101: AMDQKHVPSD QDQSSMLKVI CSQRDRFRAR LRETEEEIRR LKEKIGFLTD ELEKTKADNV KLYGKIRYVQ DYNHDKVVSR GSKKYVEDVE SGFSSDVESK
1201: YKKIYEDDIN PFAAFSKKER EQRIKDLGIR DRITLSSGRF LLGNKYARTF AFFYTIGLHV LVFTCLYRMS ALSYLSHGAE ETPVTETTTN LPRGF

Best Arabidopsis Sequence Match ( AT3G18480.1 )
(BLAST)

001: MEVSQDGSER DKTPPPSSSS SSSSPIPVVT NFWKEFDLEK EKSLLDEQGL RIAENQENSQ KNRRKLAEST RDFKKASPEN KLSMFNSLLK GYQEEVDNIT
101: KRAKFGENAF LNIYQKLYEA PDPFPALASI AEQDRKLSEV ESENRKMKVE LEEFRTEATH LKNQQATIRR LEERNRQLEQ QMEEKIKEVV EIKQRNLAEE
201: NQKTMELLKD REQALQDQLR QAKDSVSTMQ KLHELAQNQL FELRAQSDEE TAGKQSEVSL LMDEVERAQT RLLTLEREKG HLRSQLQTAN EDTDNKKSDN
301: IDSNSMLENS LTAKEKIISE LNMEIHNVET ALANERESHV AEIKKLNSLL NKKDTIIEEM KKELQERPSA KLVDDLRKKV KILQAVGYNS IEAEDWDAAT
401: TGEEMSKMES LLLDKNRKME HEVTQLKVQL SEKASLLEKA EAKGEELTAK VNEQQRLIQK LEDDILKGYG SKERKGALFD EWEFSEAGVA EQSEPMDQKH
501: VPSEQDQSSM LKVICSQRDR FRARLRETEE EIRRLKEKIG FLTDELEKTK ADNVKLYGKI RYVQDYNHDK VVSRGSKKYV EDLESGFSSD VESKYKKIYE
601: DDINPFAAFS KKEREQRIKD LGIRDRITLS SGRFLLGNKY ARTFAFFYTI GLHVLVFTCL YRMSAYSYLS HGAEETLMTE ATTNLPHGL

Arabidopsis Description

CASPProtein CASP [Source:UniProtKB/Swiss-Prot;Acc:Q9LS42]
SUBAcon: [golgi,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.