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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • cytosol 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, golgi, plasma membrane
BaCelLo:cytosol
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 99.8 99.59
CDY01048 Canola cytosol, golgi, plasma membrane 97.75 97.95
CDY52054 Canola cytosol, peroxisome, plasma membrane 83.23 93.78
AT3G11680.2 Thale cress plasma membrane 79.35 79.18
CDX97484 Canola plasma membrane 15.34 55.15
KRG96263 Soybean nucleus 53.99 54.66
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 53.99 54.43
KRH68006 Soybean golgi, peroxisome, plasma membrane 53.17 53.5
Solyc10g081890.1.1 Tomato nucleus 49.28 50.42
GSMUA_Achr6P35650_001 Banana plastid 45.6 49.23
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 42.13 49.16
PGSC0003DMT400072326 Potato golgi 40.29 48.4
Os04t0417000-01 Rice cytosol, plastid, vacuole 41.31 44.4
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 37.42 43.99
TraesCS2B01G314100.1 Wheat plasma membrane 40.49 43.71
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 39.67 43.5
Zm00001d025373_P001 Maize cytosol, peroxisome, plasma membrane 38.45 42.82
Zm00001d003749_P001 Maize plasma membrane 39.67 41.81
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 26.38 41.61
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 40.29 41.47
OQU81544 Sorghum peroxisome 38.04 41.33
CDX95060 Canola cytosol, golgi, plasma membrane 42.74 41.14
CDX93562 Canola cytosol, golgi, plasma membrane 42.74 41.14
CDY31146 Canola cytosol, golgi, plasma membrane 41.72 40.96
TraesCS2D01G295900.1 Wheat plasma membrane 40.49 40.91
Solyc01g007080.2.1 Tomato peroxisome 39.47 40.63
TraesCS4D01G283600.1 Wheat plasma membrane 38.65 40.56
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 35.38 40.52
CDX97489 Canola cytosol, golgi, plasma membrane 41.92 40.43
CDX97483 Canola plasma membrane 39.06 40.38
CDY31147 Canola plasma membrane 39.88 39.55
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 32.31 38.54
CDY30563 Canola plasma membrane 39.47 37.77
CDX77103 Canola golgi 39.26 37.57
CDX97487 Canola plasma membrane 29.45 37.31
CDX74373 Canola plasma membrane 35.38 36.27
CDX87698 Canola plasma membrane 21.88 35.79
CDY07155 Canola cytosol, peroxisome, plasma membrane 34.15 35.61
CDY01943 Canola plasma membrane 34.56 35.43
CDY01945 Canola plasma membrane 34.56 35.43
CDY51721 Canola plasma membrane 33.95 35.24
CDX97239 Canola plasma membrane 34.56 34.92
CDX91864 Canola plasma membrane 34.76 33.66
Solyc01g007090.1.1 Tomato cytosol 40.29 31.67
CDY24338 Canola plasma membrane 23.31 31.58
PGSC0003DMT400087967 Potato cytosol 42.74 31.43
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 20.45 31.15
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 41.92 30.83
OQU75600 Sorghum cytosol 12.47 29.76
CDY01507 Canola cytosol 31.7 29.64
CDX90432 Canola cytosol 31.7 29.52
CDX77675 Canola cytosol, golgi, plasma membrane 32.31 29.15
CDY63048 Canola plasma membrane 32.72 29.04
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 29.65 26.85
CDY26161 Canola mitochondrion 29.86 26.07
CDY19211 Canola mitochondrion 29.65 25.71
CDY42102 Canola peroxisome 27.81 24.91
CDX84992 Canola peroxisome 27.61 24.73
CDY36105 Canola cytosol, peroxisome, plasma membrane 28.22 24.21
CDY24400 Canola cytosol, peroxisome, plasma membrane 28.63 24.18
CDX81872 Canola peroxisome, plastid, vacuole 13.7 23.18
CDY18521 Canola plasma membrane 27.4 20.15
CDX87700 Canola cytosol 8.59 15.79
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 28.63 10.81
CDY18522 Canola cytosol, golgi, nucleus, plastid 1.23 0.87
CDX97488 Canola endoplasmic reticulum 0.0 0.0
Protein Annotations
EnsemblPlants:CDY08504EnsemblPlantsGene:GSBRNA2T00000278001GO:A0A078F620GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF3
PFAM:PF11744ProteinID:CDY08504ProteinID:CDY08504.1SEG:segTMHMM:TMhelixUniParc:UPI0004EDD1A8
UniProt:A0A078F620MapMan:24.3.11::::
Description
BnaA05g27400DBnaA05g27400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F620]
Coordinates
chrLK031986:+:455440..457460
Molecular Weight (calculated)
54039.9 Da
IEP (calculated)
8.973
GRAVY (calculated)
0.085
Length
489 amino acids
Sequence
(BLAST)
001: MDLNAQVKKA CFLQRLKDFP SKLKDGVTKH IKHVQKFGKD DPRRIIHSIK VGLSLTLVSM LYYVRPLYNS FGVSGMWAIL TVVVVSEFTV GGTLSKGLNR
101: AFATLIAGAL GVGAVHLARL CGHKGEPIVL GILVFSLGAA ATFSRFFPRI KQRYDYGALI FILTFSMVAV SGYRTDEILV IAYQRLSTIL IGGTICILVS
201: IFVFPVWAGE DLHKMVANNI IKLANSLEGF EGEYFPSSEK TSKGTNSSVR EYKSILTSKS TEDTLANLAR WEPGHGRFRL RHPWTKYLKI AGLVRQCAIH
301: FEVLNGCVLS DAKAPQDFIS KIQEPCSIIS REAGEALKAI AKSIKTMSRY HVCVNTHIKN SKNAIENLRL ALKVSFPETD KDLLEIIPVV TMASTLIDIV
401: SYVEKISESV DEFSVLAHFK ENLDPKLSPE LGQHHLLHKG TVKPVLEGDN EEECNNSPHV VIAVHDEQPP TVNENNVNLG AEKTTVVVV
Best Arabidopsis Sequence Match ( AT3G11680.1 )
(BLAST)
001: MDLNAQEKKA GFFQRLQDFP SKLKDDVTKR VKNVQKFAKD DPRRIIHSMK VGVALTLVSL LYYVRPLYIS FGVTGMWAIL TVVVVFEFTV GGTLSKGLNR
101: GFATLIAGAL GVGAVHLARF FGHQGEPIVL GILVFSLGAA ATFSRFFPRI KQRYDYGALI FILTFSFVAI SGYRTDEILI MAYQRLSTIL IGGTICILVS
201: IFICPVWAGE DLHKMIANNI NKLAKYLEGF EGEYFQPEKI SKETSSCVRE YKSILTSKST EDSLANLARW EPGHGRFRLR HPWKKYLKIA GLVRQCAVHL
301: EILNGYVLSN DKAPQEFESK IQEPITTMSR EVGEALKAIA KSIKTMRNDS ACVNAHIDNS KKAIKNLKIA LKSSYPETYK DLLEIIPGVT MASILIEVVN
401: CVEKIYEAVE EFSGLAHFKE TLDSKLSAEI GQHQLLHRGC VKPVLDGDNE KEDNSSCHVL ITVHDEGYLP TATAKNVLGA EKTRVDIV
Arabidopsis Description
Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.