Factsheet for PGSC0003DMT400086999

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 2
plastid 1
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400087967	Potato	cytosol	90.83	90.83
Solyc01g007090.1.1	Tomato	cytosol	79.85	85.37
PGSC0003DMT400085620	Potato	endoplasmic reticulum, plasma membrane, vacuole	26.77	57.42
PGSC0003DMT400089827	Potato	endoplasmic reticulum, golgi	32.63	52.93
PGSC0003DMT400072326	Potato	golgi	32.33	52.83
VIT_08s0105g00250.t01	Wine grape	cytosol, golgi, plasma membrane	34.74	47.63
KRG96263	Soybean	nucleus	33.53	46.17
KRH68006	Soybean	golgi, peroxisome, plasma membrane	33.53	45.88
AT3G11680.2	Thale cress	plasma membrane	32.78	44.49
CDY52054	Canola	cytosol, peroxisome, plasma membrane	28.87	44.24
PGSC0003DMT400050498	Potato	cytosol, peroxisome, plasma membrane	29.02	44.16
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	27.67	43.91
Bra038672.1-P	Field mustard	plasma membrane	31.58	42.86
CDY01048	Canola	cytosol, golgi, plasma membrane	31.28	42.62
GSMUA_Achr6P35650_001	Banana	plastid	28.72	42.16
CDY08504	Canola	cytosol, golgi, plasma membrane	30.83	41.92
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	30.83	41.84
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	26.77	39.91
Os04t0417000-01	Rice	cytosol, plastid, vacuole	27.22	39.78
PGSC0003DMT400047767	Potato	plasma membrane	25.41	39.58
Zm00001d003749_P001	Maize	plasma membrane	27.52	39.44
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	25.86	39.18
TraesCS2B01G314100.1	Wheat	plasma membrane	26.62	39.07
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	24.06	38.46
OQU81544	Sorghum	peroxisome	25.86	38.22
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	24.36	37.94
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	26.77	37.47
TraesCS2D01G295900.1	Wheat	plasma membrane	26.62	36.57
TraesCS4D01G283600.1	Wheat	plasma membrane	25.56	36.48
PGSC0003DMT400000350	Potato	endoplasmic reticulum, golgi	18.2	33.43
OQU75600	Sorghum	cytosol	9.62	31.22
PGSC0003DMT400075167	Potato	golgi	12.78	30.04
PGSC0003DMT400052884	Potato	cytosol	22.56	27.88
PGSC0003DMT400033766	Potato	cytosol	20.3	25.14
PGSC0003DMT400069527	Potato	plasma membrane	20.0	23.67
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	20.15	23.47
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	21.05	23.18
PGSC0003DMT400005384	Potato	plasma membrane	17.44	17.39

Protein Annotations

EnsemblPlants:PGSC0003DMT400086999	EnsemblPlantsGene:PGSC0003DMG400036570	EntrezGene:107060826	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015743	GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	ncoils:Coil	PANTHER:PTHR31086
PANTHER:PTHR31086:SF3	PFAM:PF11744	PGSC:PGSC0003DMG400036570	RefSeq:XP_015164680.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002961784	UniProt:M1DCY8	MapMan:24.3.11	:	:	:

Description

Aluminum-activated malate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400036570]

Coordinates

chr1:+:3005120..3009296

Molecular Weight (calculated)

74504.2 Da

IEP (calculated)

6.302

GRAVY (calculated)

-0.070

Length

665 amino acids

Sequence
(BLAST)

001: MEIDSTNQEN LSVFTKWWNK LKDFPRKFQI KIGKIAKNTK QIGKDDPRKI WHAFKVGLAL TLVSLFYYTE PLFHNFDEPV MWAVLTVVVT FEFTAGATIS
101: KSINRGIGTA LAGAFGLGAK YLAELIGREG PNPIVLGVLV FIVGALGTFT RFYPHIKRRY DYGTMIFVLT FCLVAVSGYR SENIFQLAHR RISTILVGVF
201: TVMIISMIIR PVWAGEDLHK LASTNLEKLA TYLEGFGSEY FHMSEIKSVE GNNNNEKGFH EAFLSILGSK AIEESLANLA LWEPPHGAFK FNHPWKQYLK
301: IGNLVRKCAC HLLALSSHIY SKSQAPNEFE RRTEEACKKM IMESKKALKE LALSIKTMAQ PISSIRNTKN VIDDLKLTLG ISKTFFRYDE SRVMDCVPTA
401: SIMSLLISVT KCVDEISEAI EELSSKARFE KKSLLPATTS RSHRSQILHR GTVNPIVEDE VDGGDFVKIE IGDNVEPKGK VVVEEVNPIV EDDVDGGDFV
501: TIEIGDNVES KGKVVVEEVN QMSNQISAKK EESFVIWIHG STAMAIVEEM KTPKKIRDFM DLVDIKLYNS TQFFESTEGV LTSLEGVNQV SNPLAVTEGE
601: PVVIGICGNT TTTKVEEMEM SEKKVELTYL ANIKFDNSIQ FLESILMTVT TTVEEMKTAE KKETL

Best Arabidopsis Sequence Match ( AT3G11680.2 )
(BLAST)

001: MEMDLNAQEK KAGFFQRLQD FPSKLKDDVT KRVKNVQKFA KDDPRRIIHS MKVGVALTLV SLLYYVRPLY ISFGVTGMWA ILTVVVVFEF TVGGTLSKGL
101: NRGFATLIAG ALGVGAVHLA RFFGHQGEPI VLGILVFSLG AAATFSRFFP RIKQRYDYGA LIFILTFSFV AISGYRTDEI LIMAYQRLST ILIGGTICIL
201: VSIFICPVWA GEDLHKMIAN NINKLAKYLE GFEGEYFQPE KISKETSSCV REYKSILTSK STEDSLANLA RWEPGHGRFR LRHPWKKYLK IAGLVRQCAV
301: HLEILNGYVL SNDKAPQEFE SKIQEPITTM SREVGEALKA IAKSIKTMRN DSACVNAHID NSKKAIKNLK IALKSSYPET YKDLLEIIPG VTMASILIEV
401: VNCVEKIYEA VEEFSGLAHF KETLDSKLSA EIGQHQLLHR GCVKPVLDGD NEKEDNSSCH VLITVHDEGY LPTATAKNVL GAEKTRVDIV

Arabidopsis Description

Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.