Factsheet for PGSC0003DMT400089827

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

cytosol 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400085620	Potato	endoplasmic reticulum, plasma membrane, vacuole	69.02	91.29
Solyc01g007080.2.1	Tomato	peroxisome	86.59	74.74
PGSC0003DMT400072326	Potato	golgi	46.59	46.93
VIT_08s0105g00250.t01	Wine grape	cytosol, golgi, plasma membrane	41.46	35.05
GSMUA_Achr6P35650_001	Banana	plastid	38.54	34.88
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	35.12	34.37
KRH68006	Soybean	golgi, peroxisome, plasma membrane	40.73	34.36
KRG96263	Soybean	nucleus	39.76	33.75
CDY52054	Canola	cytosol, peroxisome, plasma membrane	35.61	33.64
AT3G11680.2	Thale cress	plasma membrane	39.76	33.27
PGSC0003DMT400047767	Potato	plasma membrane	34.15	32.79
PGSC0003DMT400086999	Potato	cytosol, endoplasmic reticulum, plasma membrane	52.93	32.63
PGSC0003DMT400087967	Potato	cytosol	52.93	32.63
CDY08504	Canola	cytosol, golgi, plasma membrane	38.54	32.31
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	38.54	32.24
Bra038672.1-P	Field mustard	plasma membrane	38.54	32.24
CDY01048	Canola	cytosol, golgi, plasma membrane	38.29	32.17
Os04t0417000-01	Rice	cytosol, plastid, vacuole	35.12	31.65
PGSC0003DMT400050498	Potato	cytosol, peroxisome, plasma membrane	33.66	31.58
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	34.15	31.39
OQU75600	Sorghum	cytosol	15.61	31.22
TraesCS2B01G314100.1	Wheat	plasma membrane	33.66	30.46
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	30.73	30.29
PGSC0003DMT400000350	Potato	endoplasmic reticulum, golgi	26.59	30.11
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	32.2	30.07
OQU81544	Sorghum	peroxisome	32.68	29.78
Zm00001d003749_P001	Maize	plasma membrane	33.66	29.74
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	30.49	29.27
TraesCS4D01G283600.1	Wheat	plasma membrane	33.17	29.18
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	33.66	29.05
TraesCS2D01G295900.1	Wheat	plasma membrane	33.66	28.51
PGSC0003DMT400075167	Potato	golgi	18.78	27.21
PGSC0003DMT400052884	Potato	cytosol	26.83	20.45
PGSC0003DMT400033766	Potato	cytosol	22.93	17.5
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	24.15	17.34
PGSC0003DMT400069527	Potato	plasma membrane	23.41	17.08
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	23.9	16.23
PGSC0003DMT400005384	Potato	plasma membrane	22.2	13.64

Protein Annotations

EnsemblPlants:PGSC0003DMT400089827	EnsemblPlantsGene:PGSC0003DMG400039398	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015743
GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF3	PFAM:PF11744
PGSC:PGSC0003DMG400039398	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002964255	UniProt:M1DJ06	MapMan:24.3.11

Description

Aluminum-activated malate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400039398]

Coordinates

chr1:-:2982705..2987854

Molecular Weight (calculated)

45128.9 Da

IEP (calculated)

7.733

GRAVY (calculated)

0.007

Length

410 amino acids

Sequence
(BLAST)

001: MAVLTVMVAF EYTAGATISK CLNIAFATAL GVSLGIGAKY LAKFCGKEGE PIILGCLVFI LGALGTFTRF YPHMQRRYDY GCMFSVATFS LVTVSGDRYL
101: ELVKQRISTI MVSVATVMAI SLVIRPVWAG KDLHNLIIAN LEKLASFLDG FESEYFQAIG EGSKDKEKGF LEALKNVLGS KATEESLANF AWWEPANGPF
201: RFNNPGKEYL KIGNLGRDCA CHLHALSGHL KSKSKAPTEF HKRTEEAYKR IITKSSNALK CLALSIKTAT QPPSSTGEPD PYNAKFAIDE LRAALLITTR
301: TISEEDTIDV IMAMSVASIL IDVTRCVDEI SKAVGELSIK TRFQKEDKKK DNSTSIKVLE KLPAPRLQII HREIVNAAVK EEENPIDAIK GEHVVCEIHV
401: IEEEIKAEGK

Best Arabidopsis Sequence Match ( AT1G08430.1 )
(BLAST)

001: MEKVREIVRE GIRVGNEDPR RIIHAFKVGL ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLGKGLNR GVATLVAGGL GIGAHQLARL
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ

Arabidopsis Description

ALMT1Aluminum-activated malate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.