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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • cytosol 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08504 Canola cytosol, golgi, plasma membrane 99.59 99.8
Bra038672.1-P Field mustard plasma membrane 87.96 87.96
AT3G11680.2 Thale cress plasma membrane 79.39 79.39
KRG96263 Soybean nucleus 53.88 54.66
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 53.88 54.43
KRH68006 Soybean golgi, peroxisome, plasma membrane 53.06 53.5
Solyc10g081890.1.1 Tomato nucleus 49.18 50.42
GSMUA_Achr6P35650_001 Banana plastid 45.51 49.23
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 42.04 49.16
PGSC0003DMT400072326 Potato golgi 40.2 48.4
Os04t0417000-01 Rice cytosol, plastid, vacuole 41.22 44.4
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 37.35 43.99
TraesCS2B01G314100.1 Wheat plasma membrane 40.41 43.71
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 39.59 43.5
Zm00001d025373_P001 Maize cytosol, peroxisome, plasma membrane 38.37 42.82
Zm00001d003749_P001 Maize plasma membrane 39.59 41.81
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 26.33 41.61
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 40.2 41.47
Bra018625.1-P Field mustard cytosol, golgi, plasma membrane 42.86 41.34
OQU81544 Sorghum peroxisome 37.96 41.33
Bra030726.1-P Field mustard cytosol, golgi, plasma membrane 41.63 40.96
TraesCS2D01G295900.1 Wheat plasma membrane 40.41 40.91
Solyc01g007080.2.1 Tomato peroxisome 39.39 40.63
TraesCS4D01G283600.1 Wheat plasma membrane 38.57 40.56
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 35.31 40.52
Bra030725.1-P Field mustard plasma membrane 40.0 39.84
Bra034339.1-P Field mustard golgi 39.39 39.23
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 32.24 38.54
Bra037402.1-P Field mustard cytosol, peroxisome, plasma membrane 33.27 34.61
Bra008542.1-P Field mustard plasma membrane 31.84 34.44
Bra000933.1-P Field mustard plasma membrane 34.29 31.82
Solyc01g007090.1.1 Tomato cytosol 40.2 31.67
PGSC0003DMT400087967 Potato cytosol 42.65 31.43
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 41.84 30.83
OQU75600 Sorghum cytosol 12.45 29.76
Bra012627.1-P Field mustard cytosol 30.82 28.22
Bra025011.1-P Field mustard plasma membrane 32.45 27.04
Bra022048.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 29.59 26.85
Bra025906.1-P Field mustard mitochondrion 30.2 25.47
Bra002062.1-P Field mustard cytosol, peroxisome, plasma membrane 28.57 25.04
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 28.57 24.22
Bra024742.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 27.76 23.99
Bra037581.1-P Field mustard golgi, mitochondrion, nucleus, plasma membrane 28.57 10.58
Protein Annotations
EnsemblPlants:Bra034819.1EnsemblPlants:Bra034819.1-PEnsemblPlantsGene:Bra034819GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF3
PFAM:PF11744SEG:segTMHMM:TMhelixUniParc:UPI0002547629UniProt:M4F173MapMan:24.3.11
Description
AT3G11680 (E=4e-206) | unknown protein
Coordinates
chrA05:+:21558011..21560035
Molecular Weight (calculated)
54173.0 Da
IEP (calculated)
9.111
GRAVY (calculated)
0.075
Length
490 amino acids
Sequence
(BLAST)
001: MDLNAQVKKA CFLQRLKDFP SKLKDGVTKR IKHVQKFGKD DPRRIIHSIK VGLSLTLVSM LYYVRPLYNS FGVSGMWAIL TVVVVSEFTV GGTLSKGLNR
101: AFATLIAGAL GVGAVHLARL CGHKGEPIVL GILVFSLGAA ATFSRFFPRI KQRYDYGALI FILTFSMVAV SGYRTDEILV IAYQRLSTIL IGGTICILVS
201: IFVFPVWAGE DLHKMVANNI IKLANSLEGF EGEYFPSSEK TSKGTNSSVR EYKSINLTSK STEDTLANLA RWEPGHGRFR LRHPWTKYLK IAGLVRQCAI
301: HFEVLNGCVL SDAKAPQDFI SKIQEPCSII SREAGEALKA IAKSIKTMSR YHVCVNTHIK NSKNAIENLR LALKVSFPET DKDLLEIIPV VTMASTLIDI
401: VSYVEKISES VDEFSVLAHF KENLDPKLSP ELGQHHLLHK GTVKPVLEGD NEEECNNSPH VVIAVHDEQP PTVNENNVNL GAEKTTVVVV
Best Arabidopsis Sequence Match ( AT3G11680.1 )
(BLAST)
001: MDLNAQEKKA GFFQRLQDFP SKLKDDVTKR VKNVQKFAKD DPRRIIHSMK VGVALTLVSL LYYVRPLYIS FGVTGMWAIL TVVVVFEFTV GGTLSKGLNR
101: GFATLIAGAL GVGAVHLARF FGHQGEPIVL GILVFSLGAA ATFSRFFPRI KQRYDYGALI FILTFSFVAI SGYRTDEILI MAYQRLSTIL IGGTICILVS
201: IFICPVWAGE DLHKMIANNI NKLAKYLEGF EGEYFQPEKI SKETSSCVRE YKSILTSKST EDSLANLARW EPGHGRFRLR HPWKKYLKIA GLVRQCAVHL
301: EILNGYVLSN DKAPQEFESK IQEPITTMSR EVGEALKAIA KSIKTMRNDS ACVNAHIDNS KKAIKNLKIA LKSSYPETYK DLLEIIPGVT MASILIEVVN
401: CVEKIYEAVE EFSGLAHFKE TLDSKLSAEI GQHQLLHRGC VKPVLDGDNE KEDNSSCHVL ITVHDEGYLP TATAKNVLGA EKTRVDIV
Arabidopsis Description
Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.