Factsheet for Bra018625.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93562	Canola	cytosol, golgi, plasma membrane	99.21	99.21
AT1G08440.1	Thale cress	cytosol, golgi, plasma membrane	85.63	86.83
Bra030726.1-P	Field mustard	cytosol, golgi, plasma membrane	84.65	86.35
Bra030725.1-P	Field mustard	plasma membrane	73.23	75.61
Bra034339.1-P	Field mustard	golgi	65.55	67.68
VIT_06s0009g00450.t01	Wine grape	plasma membrane	49.21	52.19
Solyc11g068970.1.1	Tomato	cytosol, peroxisome, plasma membrane	47.24	51.39
KRH30357	Soybean	plasma membrane	48.23	50.72
KRH25315	Soybean	plasma membrane	47.64	50.31
PGSC0003DMT400050498	Potato	cytosol, peroxisome, plasma membrane	41.93	48.74
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	37.4	45.35
GSMUA_Achr6P35650_001	Banana	plastid	39.37	44.15
Bra038672.1-P	Field mustard	plasma membrane	41.73	43.27
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	41.34	42.86
TraesCS2B01G314100.1	Wheat	plasma membrane	38.19	42.83
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	36.81	41.93
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	34.06	41.59
Os04t0417000-01	Rice	cytosol, plastid, vacuole	37.01	41.32
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	37.8	40.42
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	34.84	40.32
Zm00001d003749_P001	Maize	plasma membrane	36.61	40.09
TraesCS2D01G295900.1	Wheat	plasma membrane	38.19	40.08
OQU81544	Sorghum	peroxisome	35.04	39.56
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	32.48	38.64
TraesCS4D01G283600.1	Wheat	plasma membrane	33.86	36.91
Bra037402.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.66	36.31
Bra008542.1-P	Field mustard	plasma membrane	31.69	35.54
OQU75600	Sorghum	cytosol	13.78	34.15
Bra000933.1-P	Field mustard	plasma membrane	34.06	32.77
Bra012627.1-P	Field mustard	cytosol	29.72	28.22
Bra022048.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	29.72	27.96
Bra025011.1-P	Field mustard	plasma membrane	29.92	25.85
Bra002062.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.8	22.54
Bra025906.1-P	Field mustard	mitochondrion	25.59	22.38
Bra024742.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	24.8	22.22
Bra010995.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.2	22.15
Bra037581.1-P	Field mustard	golgi, mitochondrion, nucleus, plasma membrane	27.17	10.43

Protein Annotations

EnsemblPlants:Bra018625.1	EnsemblPlants:Bra018625.1-P	EnsemblPlantsGene:Bra018625	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015743	GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	ncoils:Coil	PANTHER:PTHR31086
PANTHER:PTHR31086:SF22	PFAM:PF11744	SEG:seg	TMHMM:TMhelix	UniParc:UPI000253E730	UniProt:M4DQ34
MapMan:24.3.11	:	:	:	:	:

Description

AT1G08440 (E=6e-198) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0005 (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1); malate transmembrane transporter (TAIR:AT1G08430.1); Has 377 Blast hits to 376 proteins in 91 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 4; Plants - 211; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).

Coordinates

chrA06:+:2911577..2914324

Molecular Weight (calculated)

56533.8 Da

IEP (calculated)

7.013

GRAVY (calculated)

-0.069

Length

508 amino acids

Sequence
(BLAST)

001: MEKVREIVRE GRRVGKEDPR RVVHAFKVGL ALALVSSFYY YQPLYDNFGV NAMWAVMTVV VVFEFSVGAT LGKGINRAVA TLVAGGLGIG AHHLASLSGP
101: TIEPILLAIF VFVQAALSTF VRFFPRVKAR YDYGILIFIL TFSLISVSGF REDEILDWAH KRLSTVIMGG VSCVLISIFV CPVWAGQDLH SLIASNLDTL
201: SHFLQEFREE YFEATDDGDI KEVEKRRKNL ERYKSVLNSK SNEEALANFA RWEPRHGQFR FRHPWQQYLA VAALLRQCAY RIDALNSYLN SDFQIPMDIK
301: KKLEEPLRRM SSEAGKSLKE MSISLKKMTK SSSSDIHVLN SQSACKDLST LLKSGILNDV EPLQLISLTT TVSLLIDIVN LTEKISESVH ELASAARFKN
401: KMKPTASLKK SDSVSIGRAA VPIKSHDSDD HVVTILCDAD VSNTVDQSRG ETSVDSCHHV AIKIDDDDLV HEKHEVGEIH AHTSCVSCDP SDASDVLDSS
501: NKRINSSN

Best Arabidopsis Sequence Match ( AT1G08440.1 )
(BLAST)

001: MEKVREIVRE GRRVGKEDPR RVVHAFKVGL ALALVSSFYY YQPLYDNFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRAVA TLVAGGLGIG AHHLASLSGP
101: TVEPILLAIF VFVLAALSTF VRFFPRVKAR YDYGVLIFIL TFALISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFV CPVWAGQDLH SLLASNFDTL
201: SHFLQEFGDE YFEATEDGDI KEVEKRRRNL ERYKSVLNSK SNEEALANFA KWEPRHGQFR FRHPWRQYLA VGALLRQSAY RIDALNSNIN SDMQIPMDIK
301: KKIEEPLRRM SSESGKSMKE VSISLKNMTI SSSFDIHVVN SQSACKTLST LLKSGILNDV EPLQMISLMT TVSLLIDIVN LTEKISESVH ELASAAKFKN
401: KKKPSKSNSG SIGQAMPNKS HDDDDHVVTI LGDVDTSNNV DQSQSHGEIS VDSCHHVTIK INDDDSIHDK NEDGDIHVHT NRVSCDHTNA SDLLDSGVKK
501: N

Arabidopsis Description

ALMT2Aluminum-activated malate transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE8]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.