Factsheet for Bra022048.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
plasma membrane 3
plastid 1
extracellular 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59584	Canola	cytosol, endoplasmic reticulum, plasma membrane	100.0	100.0
CDX87700	Canola	cytosol	48.89	99.25
CDX87698	Canola	plasma membrane	51.3	92.64
AT5G46600.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	78.15	78.29
Bra012627.1-P	Field mustard	cytosol	67.78	68.41
Bra025011.1-P	Field mustard	plasma membrane	68.7	63.1
Solyc08g006990.1.1	Tomato	cytosol, peroxisome, plasma membrane	56.67	57.52
PGSC0003DMT400052884	Potato	cytosol	57.22	57.43
KRH77215	Soybean	cytosol, peroxisome, plasma membrane	54.63	54.93
KRH28280	Soybean	peroxisome	54.26	54.56
KRH58213	Soybean	cytosol	52.78	54.29
Solyc06g061100.2.1	Tomato	plasma membrane	52.22	54.02
KRG90598	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	51.3	53.37
KRG90599	Soybean	plasma membrane	48.7	53.02
KRH04324	Soybean	cytosol	52.59	52.69
EER90182	Sorghum	mitochondrion	50.74	51.8
Os10t0572100-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	50.56	51.61
KRH36161	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	48.89	51.26
TraesCS1D01G194000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	50.19	51.23
TraesCS1A01G189900.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	50.19	51.13
TraesCS1B01G192000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	50.0	51.04
KRG90597	Soybean	golgi, mitochondrion	47.96	50.59
HORVU1Hr1G049820.21	Barley	endoplasmic reticulum, peroxisome	50.37	49.82
Zm00001d036652_P001	Maize	mitochondrion	49.63	47.77
GSMUA_Achr4P21730_001	Banana	plasma membrane	52.59	45.51
VIT_02s0012g01030.t01	Wine grape	plasma membrane	51.67	37.86
KRH04321	Soybean	golgi	50.37	37.21
PGSC0003DMT400005384	Potato	plasma membrane	41.85	33.88
KRH36162	Soybean	endoplasmic reticulum, plasma membrane, plastid	49.26	32.72
Bra037402.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.78	31.85
Bra038672.1-P	Field mustard	plasma membrane	28.15	31.02
Bra030726.1-P	Field mustard	cytosol, golgi, plasma membrane	28.15	30.52
Bra008542.1-P	Field mustard	plasma membrane	25.56	30.46
Bra030725.1-P	Field mustard	plasma membrane	27.41	30.08
Bra018625.1-P	Field mustard	cytosol, golgi, plasma membrane	27.96	29.72
Bra034339.1-P	Field mustard	golgi	27.04	29.67
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	26.85	29.59
Bra000933.1-P	Field mustard	plasma membrane	27.41	28.03
Bra025906.1-P	Field mustard	mitochondrion	28.52	26.51
Bra024742.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	27.78	26.45
Bra010995.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.22	25.43
Bra002062.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.3	25.4
Bra037581.1-P	Field mustard	golgi, mitochondrion, nucleus, plasma membrane	28.89	11.79

Protein Annotations

EnsemblPlants:Bra022048.1	EnsemblPlants:Bra022048.1-P	EnsemblPlantsGene:Bra022048	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015743	GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF2
PFAM:PF11744	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002545F3D	UniProt:M4DZV1	MapMan:24.3.11

Description

AT5G46600 (E=6e-217) | unknown protein

Coordinates

chrA02:-:18882786..18886520

Molecular Weight (calculated)

60539.6 Da

IEP (calculated)

9.476

GRAVY (calculated)

-0.083

Length

540 amino acids

Sequence
(BLAST)

001: MWNKSMEITM EDEGSRRTRK KIEHPKKMKN ILKSLWNVGK EDTRRLKHAL KVGVSLTLVS LLYLMEPFFK GIGKNAIWAV MTVVVVLEFS AGATLRKGLN
101: RGIGTLIAGS LAYLIEFVAV NSGKIFGGIF IGAAVFIIGS TITYMRFVPY VKKNYDYGML VFLLTFNLIT VSSYRIDTVI KIAHQRLLTI AMGIGICLFM
201: SLLVFPIWSG DDLHMSTVTK FQGLSRSIEA CVKKYFEEKE RDKEDSDSES DDDDVIYKGY KTVLDSKSSD EALAMYASWE PRHTLRCNKF PSQQYTKIGS
301: VLRKFGHTVV ALHGCLQTEI QTPRSIRTLF KDPCVRLAGE ICKVLSELSE SILNKRHCSP EILSDNLEVA LKDLNAAIKS QPKLFLGSNL HSDITNKHLN
401: RNVSYYNDSN NVDGNVLSQT TPQNVTVSQA RFNSTVSLSS FMGQTSHRKS VNKPGPVGEK RRFRKQLSKA AVMKSLEFSE ALPFAAFASL LVEMVARLGT
501: VIDEVEELGS ISCFKEYDKI VDRTDVEVRI EKPVDLVVGD

Best Arabidopsis Sequence Match ( AT5G46600.1 )
(BLAST)

001: MGYKVEARSM EISMEDEDSR KKRKKGLNLP KKMKKILRNL WNVGKEDPRR VIHALKVGVA LTLVSLLYLM EPFFEGVGKN ALWAVMTVVV VLEFSAGATL
101: RKGLNRGLGT LIAGSLAFFI EWVAIHSGKI LGGIFIGTSV FTIGSMITYM RFIPYIKKNY DYGMLVFLLT FNLITVSSYR VDTVIKIAHE RLYTIGMGIG
201: ICLFMSLLFF PIWSGDDLHK STITKLQGLS RCIEACVSEY FEEKLKDNET SDSESDDEDL IYNGYNTVLD SKSADEALAM YAKWEPRHTR RCNKFPSQQY
301: IKVGSVLRKF GYTVVALHGC LQTEIQTPRS IRVLFKDPCV RLAGEICKVL SELSESIQNR RHCSSEILSD SLEAALKDLN STIKSQPKLF LGSNLHSNIT
401: NKHLNGHVSY YNETNSNGTV SYHNDNNTNG CVLGETIEEN DTVSPLPLNS VVSLSSLRSV KKSAATGEKR RLRKQLSKIA VMKSLEFSEA LPFAAFASLL
501: VEMVARLDTV IDEVEELGTI ACFKEYDKTV EVRIENRLI

Arabidopsis Description

ALMT13Aluminum-activated malate transporter 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS23]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.