CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036652_P001	Maize	mitochondrion	91.68	86.45
Os10t0572100-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	78.64	78.64
TraesCS1D01G194000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	75.61	75.61
TraesCS1A01G189900.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	75.61	75.47
TraesCS1B01G192000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	75.43	75.43
HORVU1Hr1G049820.21	Barley	endoplasmic reticulum, peroxisome	75.05	72.71
CDX90432	Canola	cytosol	57.66	58.1
CDY01507	Canola	cytosol	57.28	57.94
KRH77215	Soybean	cytosol, peroxisome, plasma membrane	58.22	57.36
Solyc08g006990.1.1	Tomato	cytosol, peroxisome, plasma membrane	57.66	57.33
KRH28280	Soybean	peroxisome	58.03	57.17
PGSC0003DMT400052884	Potato	cytosol	57.09	56.13
Bra012627.1-P	Field mustard	cytosol	56.71	56.07
KRH58213	Soybean	cytosol	55.2	55.62
AT4G17970.1	Thale cress	cytosol	58.22	55.0
CDX87698	Canola	plasma membrane	30.62	54.18
KRH04324	Soybean	cytosol	55.2	54.17
KRG90598	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	52.74	53.76
GSMUA_Achr4P21730_001	Banana	plasma membrane	63.33	53.69
KRG90599	Soybean	plasma membrane	49.34	52.62
Solyc06g061100.2.1	Tomato	plasma membrane	51.42	52.11
CDX77675	Canola	cytosol, golgi, plasma membrane	53.12	51.84
KRH36161	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	50.47	51.84
KRG90597	Soybean	golgi, mitochondrion	50.09	51.76
CDY63048	Canola	plasma membrane	53.31	51.18
AT5G46610.1	Thale cress	cytosol, peroxisome, plasma membrane	52.17	50.83
CDY59584	Canola	cytosol, endoplasmic reticulum, plasma membrane	51.8	50.74
Bra022048.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	51.8	50.74
AT5G46600.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	50.47	49.54
Bra025011.1-P	Field mustard	plasma membrane	52.74	47.45
CDX87700	Canola	cytosol	22.87	45.49
AT4G17585.1	Thale cress	cytosol	11.72	40.79
VIT_02s0012g01030.t01	Wine grape	plasma membrane	55.95	40.16
KRH04321	Soybean	golgi	52.17	37.76
PGSC0003DMT400005384	Potato	plasma membrane	42.16	33.43
EES05741	Sorghum	cytosol	31.38	33.2
OQU81544	Sorghum	peroxisome	28.17	33.11
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	27.6	32.74
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	26.09	32.32
KRH36162	Soybean	endoplasmic reticulum, plasma membrane, plastid	49.53	32.23
EES12682	Sorghum	cytosol	29.68	31.85
OQU85465	Sorghum	golgi	29.68	30.31
EER89585	Sorghum	plastid	30.06	25.81
OQU75600	Sorghum	cytosol	9.45	24.39
EER89808	Sorghum	cytosol, endoplasmic reticulum, peroxisome, plastid	30.62	24.07

Protein Annotations

MapMan:24.3.11	InterPro:ALMT	UniProt:C5Z7N0	ncoils:Coil	EnsemblPlants:EER90182	ProteinID:EER90182
ProteinID:EER90182.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0015743	GO:GO:0016020	GO:GO:0016021	GO:GO:0016671
GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114	GO:GO:0098869
PFAM:PF11744	PANTHER:PTHR31086	PANTHER:PTHR31086:SF2	EnsemblPlantsGene:SORBI_3010G220700	unigene:Sbi.12154	TMHMM:TMhelix
UniParc:UPI0007F2BBC4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:56289963..56292569

Molecular Weight (calculated)

58165.6 Da

IEP (calculated)

9.303

GRAVY (calculated)

0.113

Length

529 amino acids

Sequence
(BLAST)

001: MGMASSLSSF NKKSTLLMLT APVKSIGRIP ASWGRHAWSI GREDPRRAVH ALKAGTALTL VSLLYILEPF FKGIGKNAMW AVMTVVVVLE FTAGATICKG
101: LNRGLGTVLA GSLALLIEFI AAGTGQVLRA FIVGASVFII GFAATYVRFF PTIKKSYDYG VLIFLLTFNL ITVSSYRQQD VVSLTRDRLS TIAIGCAICL
201: FMTLLVLPNW SGEDLHSSTV GKFEGLATSI EACVNEYFRD RDKGDNVLDK QEEARASIQI GYRAVLDSKS SDETLAHYAS WEPRHSMHCY SYPWQKYVKL
301: GSVLRHFAYT VAALHGCLDS EIQTPPSVRT LFRDPCTRVA REVAKVLQEL AVSIKHHRRC APDVLSDHLH EALQDLNSAI RSQPRLFLGS KRACAANKRM
401: LMELNSGKLS ASRATALHSF KTDATALSET RGPPDRVERG SMLRPTLSKI AITSLEFSEA LPFAAFASLL VEMVVRLELV IEEVKNLERA ANFREFVTGH
501: DHLIVDVSSM EKTRNSNAAP LHPVSAAAE

Best Arabidopsis Sequence Match ( AT4G17970.1 )
(BLAST)

001: MSNKVHVGSL EMEEGLSKTK WMVLEPSEKI KKIPKRLWNV GKEDPRRVIH ALKVGLSLTL VSLLYLMEPL FKGIGSNAIW AVMTVVVVLE FSAGATLCKG
101: LNRGLGTLIA GSLAFFIEFV ANDSGKVLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS VINIAHDRFY TIAVGCGICL
201: FMSLLVFPIW SGEDLHKTTV GKLQGLSRSI EACVDEYFEE KEKEKTDSKD RIYEGYQAVL DSKSTDETLA LYANWEPRHT LRCHRFPCQQ YVKVGAVLRQ
301: FGYTVVALHG CLQTEIQTPR SVRALFKDPC VRLAGEVCKA LTELADSISN HRHCSPEILS DHLHVALQDL NSAIKSQPKL FLGSNLHRHN NKHQNGSISN
401: NKHHQRNSSN SGKDLNGDVS LQNTETGTRK ITETGSRQGQ NGAVSLSSFR TDTSALMEYR RSFKNSNSEM SAAGERRMLR PQLSKIAVMT SLEFSEALPF
501: AAFASLLVEM VARLDNVIEE VEELGRIASF KEYDNKRDQT ADDVRCENPA NVTISVGAAE

Arabidopsis Description

ALMT12Aluminum-activated malate transporter 12 [Source:UniProtKB/Swiss-Prot;Acc:O49696]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.