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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU75600 Sorghum cytosol 45.56 100.0
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 94.0 99.06
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 65.11 65.7
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 60.67 65.62
TraesCS2B01G314100.1 Wheat plasma membrane 65.78 65.34
Os04t0417000-01 Rice cytosol, plastid, vacuole 64.22 63.52
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 65.56 62.11
TraesCS2D01G295900.1 Wheat plasma membrane 66.22 61.57
TraesCS4D01G283600.1 Wheat plasma membrane 60.67 58.58
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 52.0 55.85
GSMUA_Achr6P35650_001 Banana plastid 55.11 54.75
CDX97484 Canola plasma membrane 14.89 49.26
CDY52054 Canola cytosol, peroxisome, plasma membrane 41.56 43.09
VIT_06s0009g00450.t01 Wine grape plasma membrane 45.56 42.8
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 45.11 41.86
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 43.11 41.54
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 39.33 40.5
KRH25315 Soybean plasma membrane 42.89 40.12
KRH26686 Soybean golgi, peroxisome, plasma membrane 38.44 39.77
KRH30357 Soybean plasma membrane 42.67 39.75
VIT_06s0080g00170.t01 Wine grape golgi, peroxisome, plasma membrane 44.67 39.72
PGSC0003DMT400047767 Potato plasma membrane 37.56 39.58
VIT_06s0009g00480.t01 Wine grape golgi, peroxisome, plasma membrane 43.56 39.44
Solyc10g081890.1.1 Tomato nucleus 41.33 38.91
Bra038672.1-P Field mustard plasma membrane 42.22 38.78
KRH26685 Soybean plasma membrane 38.44 38.7
Solyc11g071350.1.1 Tomato nucleus 38.0 38.17
VIT_06s0080g00200.t01 Wine grape plasma membrane 24.0 38.16
CDY08504 Canola cytosol, golgi, plasma membrane 41.33 38.04
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 41.33 37.96
CDY01048 Canola cytosol, golgi, plasma membrane 41.11 37.91
KRG96263 Soybean nucleus 40.67 37.89
KRH68006 Soybean golgi, peroxisome, plasma membrane 40.67 37.65
CDX97483 Canola plasma membrane 39.56 37.63
AT3G11680.2 Thale cress plasma membrane 40.67 37.35
PGSC0003DMT400072326 Potato golgi 33.56 37.1
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 25.11 36.45
Solyc06g074100.1.1 Tomato plasma membrane 37.78 36.4
CDY31147 Canola plasma membrane 38.89 35.5
Bra030725.1-P Field mustard plasma membrane 38.67 35.37
AT1G08440.1 Thale cress cytosol, golgi, plasma membrane 39.33 35.33
Bra018625.1-P Field mustard cytosol, golgi, plasma membrane 39.56 35.04
CDX93562 Canola cytosol, golgi, plasma membrane 39.56 35.04
CDX95060 Canola cytosol, golgi, plasma membrane 39.56 35.04
Bra030726.1-P Field mustard cytosol, golgi, plasma membrane 38.67 34.94
CDY31146 Canola cytosol, golgi, plasma membrane 38.67 34.94
Bra034339.1-P Field mustard golgi 38.0 34.76
AT2G27240.1 Thale cress golgi 38.44 34.19
CDX97489 Canola cytosol, golgi, plasma membrane 38.0 33.73
Solyc01g007080.2.1 Tomato peroxisome 35.56 33.68
CDY30563 Canola plasma membrane 38.22 33.66
CDX77103 Canola golgi 38.22 33.66
AT1G08430.1 Thale cress golgi 36.67 33.47
EES12682 Sorghum cytosol 36.67 33.47
EES05741 Sorghum cytosol 37.11 33.4
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 29.78 32.68
CDX97487 Canola plasma membrane 28.0 32.64
EER90182 Sorghum mitochondrion 33.11 28.17
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 18.89 26.48
PGSC0003DMT400087967 Potato cytosol 38.44 26.02
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 38.22 25.86
EER89808 Sorghum cytosol, endoplasmic reticulum, peroxisome, plastid 38.22 25.56
Solyc01g007090.1.1 Tomato cytosol 35.11 25.4
OQU85465 Sorghum golgi 27.33 23.75
EER89585 Sorghum plastid 28.67 20.94
CDX97488 Canola endoplasmic reticulum 0.0 0.0
Protein Annotations
EnsemblPlants:OQU81544EnsemblPlantsGene:SORBI_3006G075350GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015743
GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF8PFAM:PF11744
ProteinID:OQU81544ProteinID:OQU81544.1SEG:segTMHMM:TMhelixUniParc:UPI000B423DC6UniProt:A0A1Z5RCQ6
MapMan:24.3.11:::::
Description
hypothetical protein
Coordinates
chr6:-:43852598..43857966
Molecular Weight (calculated)
49019.7 Da
IEP (calculated)
7.387
GRAVY (calculated)
0.263
Length
450 amino acids
Sequence
(BLAST)
001: MESLTTEEGN SNGGGGGGGF LANCREQLRW ALDRLIISSR GTAVGFVGKL AKIARDDPRR VAHSLKVGLA LTLVSVLYYV TPLFNGWGDS VIWAVITVVV
101: VMEFTVGGTL SRGLNRTIAT LVAGFLAIAA HMAANLCGEK GEPILLGVFV FLVGSAATFS RFIPELKARY DYGVMIFILT FTMVAVSSYR VDELLEFAHE
201: RLTTVAVGVT ICLFTTLFVF PIWAGEDLHN LAADSLEKLA EFLEGMESEC FRENSPCENL EGKAFLQVYK GVLNSKVRED SLCTFAKWEP IHGKFRFRHP
301: WGQYQKLGAL CRQCASSMEA LASCVVVLKK SQYPEANPEL CLKLRATCGA MSLHSAKALR GLSLAVRTMT LPCQTNDMST AAKVASDFRT QLSEDAALLQ
401: VMHGAVVASL LSDVVIQIER ITESTSKLAR LARFTNPERP PSAVVINVED
Best Arabidopsis Sequence Match ( AT3G11680.2 )
(BLAST)
001: MEMDLNAQEK KAGFFQRLQD FPSKLKDDVT KRVKNVQKFA KDDPRRIIHS MKVGVALTLV SLLYYVRPLY ISFGVTGMWA ILTVVVVFEF TVGGTLSKGL
101: NRGFATLIAG ALGVGAVHLA RFFGHQGEPI VLGILVFSLG AAATFSRFFP RIKQRYDYGA LIFILTFSFV AISGYRTDEI LIMAYQRLST ILIGGTICIL
201: VSIFICPVWA GEDLHKMIAN NINKLAKYLE GFEGEYFQPE KISKETSSCV REYKSILTSK STEDSLANLA RWEPGHGRFR LRHPWKKYLK IAGLVRQCAV
301: HLEILNGYVL SNDKAPQEFE SKIQEPITTM SREVGEALKA IAKSIKTMRN DSACVNAHID NSKKAIKNLK IALKSSYPET YKDLLEIIPG VTMASILIEV
401: VNCVEKIYEA VEEFSGLAHF KETLDSKLSA EIGQHQLLHR GCVKPVLDGD NEKEDNSSCH VLITVHDEGY LPTATAKNVL GAEKTRVDIV
Arabidopsis Description
Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.