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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, golgi, plasma membrane
BaCelLo:cytosol
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97488 Canola endoplasmic reticulum 2.84 100.0
Bra030725.1-P Field mustard plasma membrane 98.99 99.19
CDX97483 Canola plasma membrane 90.67 94.5
CDX97484 Canola plasma membrane 21.7 78.68
CDX97487 Canola plasma membrane 61.26 78.24
AT1G08430.1 Thale cress golgi 76.27 76.27
CDX95060 Canola cytosol, golgi, plasma membrane 75.25 73.03
CDX93562 Canola cytosol, golgi, plasma membrane 74.85 72.64
CDY31146 Canola cytosol, golgi, plasma membrane 72.41 71.69
CDX97489 Canola cytosol, golgi, plasma membrane 73.23 71.2
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 43.2 66.36
CDX77103 Canola golgi 61.05 58.9
CDY30563 Canola plasma membrane 60.85 58.71
VIT_06s0009g00450.t01 Wine grape plasma membrane 46.86 48.23
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 45.23 47.75
KRH30357 Soybean plasma membrane 45.03 45.96
KRH25315 Soybean plasma membrane 44.42 45.53
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 40.16 45.31
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 37.73 44.39
CDY52054 Canola cytosol, peroxisome, plasma membrane 38.54 43.78
TraesCS2B01G314100.1 Wheat plasma membrane 39.15 42.6
GSMUA_Achr6P35650_001 Banana plastid 38.74 42.16
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 34.69 41.11
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 37.12 41.03
Os04t0417000-01 Rice cytosol, plastid, vacuole 37.73 40.88
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 38.74 40.21
CDY01048 Canola cytosol, golgi, plasma membrane 39.76 40.16
CDY08504 Canola cytosol, golgi, plasma membrane 39.55 39.88
TraesCS2D01G295900.1 Wheat plasma membrane 39.15 39.88
Zm00001d003749_P001 Maize plasma membrane 37.53 39.87
Zm00001d025373_P001 Maize cytosol, peroxisome, plasma membrane 35.5 39.86
OQU81544 Sorghum peroxisome 35.5 38.89
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 32.66 37.7
TraesCS4D01G283600.1 Wheat plasma membrane 34.89 36.91
OQU75600 Sorghum cytosol 14.6 35.12
CDX87698 Canola plasma membrane 21.3 35.12
CDY07155 Canola cytosol, peroxisome, plasma membrane 32.86 34.54
CDY01943 Canola plasma membrane 33.27 34.38
CDY01945 Canola plasma membrane 33.27 34.38
CDY51721 Canola plasma membrane 32.66 34.18
CDX74373 Canola plasma membrane 33.06 34.17
CDX97239 Canola plasma membrane 33.06 33.68
CDX91864 Canola plasma membrane 32.86 32.08
CDY01507 Canola cytosol 30.43 28.68
CDX90432 Canola cytosol 30.43 28.57
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 29.82 27.22
CDX77675 Canola cytosol, golgi, plasma membrane 29.01 26.38
CDY63048 Canola plasma membrane 29.41 26.32
CDY24338 Canola plasma membrane 19.27 26.32
CDY26161 Canola mitochondrion 27.38 24.11
CDY19211 Canola mitochondrion 27.38 23.94
CDY36105 Canola cytosol, peroxisome, plasma membrane 25.96 22.46
CDY42102 Canola peroxisome 24.75 22.34
CDX84992 Canola peroxisome 24.75 22.34
CDY24400 Canola cytosol, peroxisome, plasma membrane 25.76 21.93
CDX81872 Canola peroxisome, plastid, vacuole 11.76 20.07
CDY18521 Canola plasma membrane 26.37 19.55
CDX87700 Canola cytosol 8.92 16.54
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 26.57 10.12
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.2 0.14
Protein Annotations
EnsemblPlants:CDY31147EnsemblPlantsGene:GSBRNA2T00047236001GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015743
GO:GO:0016020GO:GO:0016021GO:Q14UU7InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF22
PFAM:PF11744ProteinID:CDY31147ProteinID:CDY31147.1SEG:segTMHMM:TMhelixUniParc:UPI0000DA8420
UniProt:Q14UU7MapMan:24.3.11::::
Description
BnaA08g26970DBnaA08g26970D protein [Source:UniProtKB/TrEMBL;Acc:Q14UU7]
Coordinates
chrLK032267:-:439010..441232
Molecular Weight (calculated)
54873.3 Da
IEP (calculated)
6.455
GRAVY (calculated)
0.058
Length
493 amino acids
Sequence
(BLAST)
001: MEKLREIVRE GRRVGEEDPR RIVHSFKVGV ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLSKGLNR GVATFVAGGL ALGAHQLASL
101: SGRTIEPILL ATFVFVTAVL ATFVRFFPRV KATFDYGMLI FILTFSLISL SQFRDEEILD LAESRLSTVL VGGVSCILIS IFVCPVWAGQ DLHSLLISNL
201: DTLSHFLQEF GGEYFEAREY GDIKVVEKRR RNLERYKSVL NSKSDEDTLA NFAKWEPPHG KFGFRHPWKQ YLVVAALLRQ CAHRIDALNS YINSDFQIPI
301: DIKKKLEEPF RRMSLESGKA LKEASISLKK MMKSSSYDIH IINSQSASKA LSTLLKSSGI LNDVEPLQMV SLLTTVSLLN DIVHITEKIS ESVRELASAA
401: SFKNKMKPTE PTVSLKKSDS GSIGCAMPIN SRDGDHVVTI LLSDDDDDTS NNVVDDDTIN EKPEDGEIHV DTSCVHGVGM MLEHSLGVRI LQI
Best Arabidopsis Sequence Match ( AT1G08430.1 )
(BLAST)
001: MEKVREIVRE GIRVGNEDPR RIIHAFKVGL ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLGKGLNR GVATLVAGGL GIGAHQLARL
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ
Arabidopsis Description
ALMT1Aluminum-activated malate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE9]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.