CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	golgi
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95521	Canola	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	99.42	52.97
Bra037581.1-P	Field mustard	golgi, mitochondrion, nucleus, plasma membrane	99.86	52.08
CDY01048	Canola	cytosol, golgi, plasma membrane	0.87	1.23
CDY08504	Canola	cytosol, golgi, plasma membrane	0.87	1.23
CDY31146	Canola	cytosol, golgi, plasma membrane	0.72	1.0
CDX95060	Canola	cytosol, golgi, plasma membrane	0.72	0.98
CDX93562	Canola	cytosol, golgi, plasma membrane	0.72	0.98
CDX97485	Canola	endoplasmic reticulum, extracellular, plasma membrane	0.43	0.93
CDX97489	Canola	cytosol, golgi, plasma membrane	0.58	0.79
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	0.43	0.5
CDX91864	Canola	plasma membrane	0.29	0.4
CDY30563	Canola	plasma membrane	0.29	0.39
CDX77103	Canola	golgi	0.29	0.39
GSMUA_Achr10P...	Banana	plasma membrane	0.29	0.37
KRH60327	Soybean	cytosol, golgi, plasma membrane	0.29	0.35
KRH41621	Soybean	golgi, peroxisome, plasma membrane	0.29	0.35
Os02t0730600-00	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	0.29	0.34
KRH48465	Soybean	mitochondrion	0.29	0.34
KRH39212	Soybean	mitochondrion	0.29	0.33
CDX97483	Canola	plasma membrane	0.14	0.21
CDY31147	Canola	plasma membrane	0.14	0.2
OQU85465	Sorghum	golgi	0.14	0.19
CDY01507	Canola	cytosol	0.14	0.19
CDX90432	Canola	cytosol	0.14	0.19
GSMUA_Achr7P18770_001	Banana	golgi, peroxisome, plasma membrane	0.14	0.19
TraesCS7B01G116000.1	Wheat	endoplasmic reticulum, plastid, vacuole	0.14	0.17
TraesCS7D01G211100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	0.14	0.17
TraesCS7A01G208700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	0.14	0.17
Zm00001d017928_P001	Maize	plasma membrane	0.14	0.17
AT3G18440.1	Thale cress	plasma membrane	0.14	0.17
Zm00001d045696_P001	Maize	mitochondrion, plastid	0.14	0.16
EER89585	Sorghum	plastid	0.14	0.16
TraesCS6B01G321600.1	Wheat	plasma membrane	0.14	0.15
TraesCS7A01G220200.1	Wheat	cytosol, peroxisome, vacuole	0.0	0.0
CDX97484	Canola	plasma membrane	0.0	0.0
Os02t0673000-01	Rice	golgi, mitochondrion, plasma membrane	0.0	0.0
CDX97239	Canola	plasma membrane	0.0	0.0
Os06t0268800-01	Rice	cytosol, plasma membrane, plastid	0.0	0.0
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	0.0	0.0
CDX87700	Canola	cytosol	0.0	0.0
PGSC0003DMT400033766	Potato	cytosol	0.0	0.0
PGSC0003DMT400069527	Potato	plasma membrane	0.0	0.0
Solyc06g072910.2.1	Tomato	peroxisome, plasma membrane, vacuole	0.0	0.0
Solyc06g072920.1.1	Tomato	endoplasmic reticulum, golgi	0.0	0.0
CDX87698	Canola	plasma membrane	0.0	0.0
KRH75405	Soybean	mitochondrion	0.0	0.0
CDX84992	Canola	peroxisome	0.0	0.0
TraesCS7B01G127200.2	Wheat	cytosol, peroxisome, vacuole	0.0	0.0
CDX81872	Canola	peroxisome, plastid, vacuole	0.0	0.0
TraesCS7D01G221900.2	Wheat	cytosol, peroxisome, plasma membrane	0.0	0.0
VIT_01s0011g03290.t01	Wine grape	plasma membrane	0.0	0.0
VIT_17s0000g03850.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	0.0	0.0
VIT_18s0122g00020.t01	Wine grape	endoplasmic reticulum, extracellular	0.0	0.0
Zm00001d010130_P001	Maize	cytosol	0.0	0.0
CDX77675	Canola	cytosol, golgi, plasma membrane	0.0	0.0
Zm00001d044350_P001	Maize	mitochondrion	0.0	0.0
CDX74373	Canola	plasma membrane	0.0	0.0
HORVU6Hr1G072900.3	Barley	peroxisome	0.0	0.0
CDY24400	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY24338	Canola	plasma membrane	0.0	0.0
CDY19211	Canola	mitochondrion	0.0	0.0
CDY36105	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY42102	Canola	peroxisome	0.0	0.0
CDY51721	Canola	plasma membrane	0.0	0.0
CDY52054	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY59584	Canola	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
CDY63048	Canola	plasma membrane	0.0	0.0
CDY18521	Canola	plasma membrane	0.0	0.0
CDY07155	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY26161	Canola	mitochondrion	0.0	0.0
HORVU7Hr1G042480.1	Barley	endoplasmic reticulum, plasma membrane, plastid	0.0	0.0
HORVU7Hr1G045290.1	Barley	extracellular, peroxisome, vacuole	0.0	0.0
KRG90790	Soybean	cytosol	0.0	0.0
KRH35972	Soybean	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY01945	Canola	plasma membrane	0.0	0.0
CDY01943	Canola	plasma membrane	0.0	0.0
KRH45244	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	0.0	0.0
CDX97488	Canola	endoplasmic reticulum	0.0	0.0
CDX97487	Canola	plasma membrane	0.0	0.0
KRH60330	Soybean	plasma membrane	0.0	0.0
KRH70564	Soybean	mitochondrion	0.0	0.0

Protein Annotations

MapMan:22.6.7.2	GO:A0A078G0K7	UniProt:A0A078G0K7	InterPro:CASP_C	EnsemblPlants:CDY18522	ProteinID:CDY18522
ProteinID:CDY18522.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0030173	EnsemblPlantsGene:GSBRNA2T00005542001	PFAM:PF08172	PANTHER:PTHR14043	PANTHER:PTHR14043:SF2	TMHMM:TMhelix
UniParc:UPI0004EDC66D	SEG:seg	:	:	:	:

Description

BnaA01g26730DBnaA01g26730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0K7]

Coordinates

chrLK032086:+:245639..250338

Molecular Weight (calculated)

79759.9 Da

IEP (calculated)

5.163

GRAVY (calculated)

-0.912

Length

690 amino acids

Sequence
(BLAST)

001: MEAVPDGSER DKTTPPPSSS SSSSSPIPVV TSFWKEFDLE KEKSLLDEQG LRIAENQENS QKNRRKLAES TRDFKKASAE DKLGMFNSLL KGYQEEVDNI
101: TKRAKFGENA FLNIYQKLYE APDPFPALAS IAEQERKLSE VESENRKMKV ELEEFRTEAT HLKNQQSTIR RLEERNRQLE QQMEEKIKEV VEIKQRNLAE
201: ENQKTLELLK DREQALQDQL RQAKDSVSTM QKLHELAQSQ LFELRAQSDE EKATKQSELS LLMDEVERAQ TRLLSLEREK GHLRSQLQTA NEDTENKNSD
301: NVDSNSMLEN SLTAKEKIIS ELNMEIHNVE TALANEREDH VAEIKKLNSL LNKKDTIIEE MNKELQERPS AKLVDDLRKK VKILQAVGYN SIEAEDWDAA
401: TTGEEMSRME SLLLDKNRKM EHEVTQLKVQ LSEKTSLLEK AEAKGEELTA KVNEQQRLIQ KLEDDILKGY SSKERKGALF NEWEFSEAGV AEQSEPMDQK
501: HVPSDQDQSS MLKVICSQRD RFRARLRETE EEIRRLKEKI GFLTDELEKT KADNVKLYGK IRYVQDYNHD KVVSRGSKKY VEDVESGFSS DVESKYKKIY
601: EDDINPFAAF SKKEREQRIK DLGIRDRITL SSGRFLLGNK YARTFAFFYT IGLHVLVFTC LYRMSALSYL SHGAEETPVT ETTTNLPRGF

Best Arabidopsis Sequence Match ( AT3G18480.1 )
(BLAST)

001: MEVSQDGSER DKTPPPSSSS SSSSPIPVVT NFWKEFDLEK EKSLLDEQGL RIAENQENSQ KNRRKLAEST RDFKKASPEN KLSMFNSLLK GYQEEVDNIT
101: KRAKFGENAF LNIYQKLYEA PDPFPALASI AEQDRKLSEV ESENRKMKVE LEEFRTEATH LKNQQATIRR LEERNRQLEQ QMEEKIKEVV EIKQRNLAEE
201: NQKTMELLKD REQALQDQLR QAKDSVSTMQ KLHELAQNQL FELRAQSDEE TAGKQSEVSL LMDEVERAQT RLLTLEREKG HLRSQLQTAN EDTDNKKSDN
301: IDSNSMLENS LTAKEKIISE LNMEIHNVET ALANERESHV AEIKKLNSLL NKKDTIIEEM KKELQERPSA KLVDDLRKKV KILQAVGYNS IEAEDWDAAT
401: TGEEMSKMES LLLDKNRKME HEVTQLKVQL SEKASLLEKA EAKGEELTAK VNEQQRLIQK LEDDILKGYG SKERKGALFD EWEFSEAGVA EQSEPMDQKH
501: VPSEQDQSSM LKVICSQRDR FRARLRETEE EIRRLKEKIG FLTDELEKTK ADNVKLYGKI RYVQDYNHDK VVSRGSKKYV EDLESGFSSD VESKYKKIYE
601: DDINPFAAFS KKEREQRIKD LGIRDRITLS SGRFLLGNKY ARTFAFFYTI GLHVLVFTCL YRMSAYSYLS HGAEETLMTE ATTNLPHGL

Arabidopsis Description

CASPProtein CASP [Source:UniProtKB/Swiss-Prot;Acc:Q9LS42]
SUBAcon: [golgi,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.