Factsheet for Bra037581.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, nucleus

Predictor Summary:

plastid 1
golgi 1
nucleus 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18522	Canola	cytosol, golgi, nucleus, plastid	52.08	99.86
AT3G18440.1	Thale cress	plasma membrane	40.14	88.8
CDY18521	Canola	plasma membrane	43.46	86.47
VIT_17s0000g03850.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	27.66	62.24
KRH60327	Soybean	cytosol, golgi, plasma membrane	26.83	61.63
GSMUA_Achr7P18770_001	Banana	golgi, peroxisome, plasma membrane	24.11	60.42
KRH39212	Soybean	mitochondrion	27.06	59.87
KRH48465	Soybean	mitochondrion	26.83	59.56
KRH41621	Soybean	golgi, peroxisome, plasma membrane	25.7	59.03
GSMUA_Achr10P...	Banana	plasma membrane	23.66	58.29
KRH60330	Soybean	plasma membrane	16.93	57.88
Bra025906.1-P	Field mustard	mitochondrion	24.94	56.8
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	25.7	56.29
VIT_18s0122g00020.t01	Wine grape	endoplasmic reticulum, extracellular	8.99	56.13
OQU85465	Sorghum	golgi	21.54	55.02
Solyc06g072920.1.1	Tomato	endoplasmic reticulum, golgi	15.95	54.66
KRH75405	Soybean	mitochondrion	22.68	54.15
KRG90790	Soybean	cytosol	22.6	54.07
KRH70564	Soybean	mitochondrion	22.37	53.72
KRH45244	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	22.52	53.41
Bra010995.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.28	53.29
PGSC0003DMT400069527	Potato	plasma membrane	22.6	53.2
Os06t0268800-01	Rice	cytosol, plasma membrane, plastid	15.57	53.09
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	22.9	53.06
Bra024742.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	22.68	52.91
HORVU7Hr1G042480.1	Barley	endoplasmic reticulum, plasma membrane, plastid	22.6	52.73
KRH35972	Soybean	cytosol, peroxisome, plasma membrane	22.3	52.58
Zm00001d010130_P001	Maize	cytosol	7.63	52.06
TraesCS7D01G211100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	23.05	51.87
TraesCS7B01G116000.1	Wheat	endoplasmic reticulum, plastid, vacuole	22.98	51.79
TraesCS7A01G208700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	22.98	51.7
Bra002062.1-P	Field mustard	cytosol, peroxisome, plasma membrane	21.69	51.34
Os02t0730600-00	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	22.3	50.51
Zm00001d017928_P001	Maize	plasma membrane	22.3	49.58
PGSC0003DMT400033766	Potato	cytosol	19.8	48.79
Zm00001d045696_P001	Maize	mitochondrion, plastid	22.68	48.78
EER89585	Sorghum	plastid	22.52	48.38
TraesCS7A01G220200.1	Wheat	cytosol, peroxisome, vacuole	21.24	48.36
TraesCS7B01G127200.2	Wheat	cytosol, peroxisome, vacuole	21.24	48.28
TraesCS7D01G221900.2	Wheat	cytosol, peroxisome, plasma membrane	21.09	48.02
HORVU7Hr1G045290.1	Barley	extracellular, peroxisome, vacuole	21.01	47.77
Solyc06g072910.2.1	Tomato	peroxisome, plasma membrane, vacuole	5.9	47.56
HORVU6Hr1G072900.3	Barley	peroxisome	20.79	44.72
TraesCS6B01G321600.1	Wheat	plasma membrane	20.94	41.91
Zm00001d044350_P001	Maize	mitochondrion	6.05	38.1
Bra012627.1-P	Field mustard	cytosol	11.94	29.53
VIT_01s0011g03290.t01	Wine grape	plasma membrane	24.87	29.14
Bra022048.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	11.79	28.89
Bra038672.1-P	Field mustard	plasma membrane	10.66	28.78
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	10.58	28.57
Bra037402.1-P	Field mustard	cytosol, peroxisome, plasma membrane	10.13	28.45
Bra008542.1-P	Field mustard	plasma membrane	9.6	28.04
Bra030726.1-P	Field mustard	cytosol, golgi, plasma membrane	10.51	27.91
Bra018625.1-P	Field mustard	cytosol, golgi, plasma membrane	10.43	27.17
Bra000933.1-P	Field mustard	plasma membrane	10.66	26.7
Bra030725.1-P	Field mustard	plasma membrane	9.9	26.63
Bra034339.1-P	Field mustard	golgi	9.75	26.22
Bra025011.1-P	Field mustard	plasma membrane	11.64	26.19
Os02t0673000-01	Rice	golgi, mitochondrion, plasma membrane	3.4	19.91

Protein Annotations

MapMan:22.6.7.2	MapMan:24.3.11	InterPro:ALMT	EnsemblPlantsGene:Bra037581	EnsemblPlants:Bra037581.1	EnsemblPlants:Bra037581.1-P
InterPro:CASP_C	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0006810	GO:GO:0006891	GO:GO:0008150	GO:GO:0015743	GO:GO:0016020
GO:GO:0016021	GO:GO:0030173	UniProt:M4F918	PFAM:PF08172	PFAM:PF11744	PANTHER:PTHR31086
PANTHER:PTHR31086:SF20	TMHMM:TMhelix	UniParc:UPI0002545046	SEG:seg	:	:

Description

AT3G18480 (E=0.0) AtCASP | AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)

Coordinates

chrA01:-:22111946..22120399

Molecular Weight (calculated)

150837.0 Da

IEP (calculated)

5.560

GRAVY (calculated)

-0.528

Length

1323 amino acids

Sequence
(BLAST)

0001: MAAKLGSFRN GKRERLLSNN GFSDLRFGDI ESNDLLEGDS HGRTRLCCCC SCGNISGKIS GVYEDAKDVG RKAWAMGVSD PRKIVFSAKI GLALTIVAVL
0101: IFYQEPNPDL SRYSVWAILT VVVVFEFTIG ATLSKGFNRA LGTLSAGGLA LGMAELSTLA GDWEELFCTV SIFCIGFIAT FMKLYPAMKA YEYGFRVFLL
0201: TYCYILISGF RTGQFIEVAI SRFLLIALGA GVSLGVNMFI YPIWAGEDLH NLVVKNFMNV ATSLEGCVNG YLHCFEYERV PSKISTYQAS EDPVYKGYRS
0301: AIESTSQEES LMSFAIWEPP HGPYRTFNYP WQNYVKLSGA LKHCAFTVMA LHGCILSEIQ APEERRQVFR QELQKVGVEG ARLLRELGEK VKKMEKLGPD
0401: DMLFEVHLAA EELQHKIDKK SYLLVNSERW EIGNRSRSEP QELLSMEDLD PPENHKSPIY AFKSQSEAVL EIPKSWGEKN HREPLNHRPT FSKQVSWPAR
0501: LVLPTHTETT NGNYQLLETT ETYESASALS LATFASLLIE FVARLQTVVY AFEELSKIAN FKEPEIVTSE SDVELDGESV GLGRKMRRCF GVERDRDPKT
0601: RIMEAVPDGS ERDKTTPPPS SSSSSSSPIP VVTSFWKDVP EKAMLIGLRK FQLTALNDFT SLLKTYVSEF DLEKEKSLLD EQGLRIAENQ ENSQKNRRKL
0701: AESTRDFKKA SAEDKLGMFN SLLKGYQEEV DNITKRAKFG ENAFLNIYQK LYEAPDPFPA LASIAEPERK LSEVESENRK MKVELEEFRT EATHLKNQQS
0801: TIRRLEERNR QLEQQMEEKI KEVVEIKQRN LAEENQKTLE LLKDREQALQ DQLRQAKDSV STMQKLHELA QSQLFELRAQ SDEEKATKQS ELSLLMDEVE
0901: RAQTRLLSLE REKGHLRSQL QTANEDTENK NSDNVDSNSM LENSLTAKEK IISELNMEIH NVETALANER EDHVAEIKKL NSLLNKKDTI IEEMNKELQE
1001: RPSAKLVDDL RKKVKILQAV GYNSIEAEDW DAATTGEEMS RMESLLLDKN RKMEHEVTQL KVQLSEKTSL LEKAEAKGEE LTAKVNEQQR LIQKLEDDIL
1101: KGYSSKERKG ALFNEWEFSE AGVAEQSEPM DQKHVPSDQD QSSMLKVICS QRDRFRARLR ETEEEIRRLK EKIGFLTDEL EKTKADNVKL YGKIRYVQDY
1201: NHDKVVSRGS KKYVEDVESG FSSDVESKYK KIYEDDINPF AAFSKKEREQ RIKDLGIRDR ITLSSGRFLL GNKYARTFAF FYTIGLHVLV FTCLYRMSAL
1301: SYLSHGAEET PVTETTTNLP RGF

Best Arabidopsis Sequence Match ( AT3G18480.1 )
(BLAST)

001: MEVSQDGSER DKTPPPSSSS SSSSPIPVVT NFWKEFDLEK EKSLLDEQGL RIAENQENSQ KNRRKLAEST RDFKKASPEN KLSMFNSLLK GYQEEVDNIT
101: KRAKFGENAF LNIYQKLYEA PDPFPALASI AEQDRKLSEV ESENRKMKVE LEEFRTEATH LKNQQATIRR LEERNRQLEQ QMEEKIKEVV EIKQRNLAEE
201: NQKTMELLKD REQALQDQLR QAKDSVSTMQ KLHELAQNQL FELRAQSDEE TAGKQSEVSL LMDEVERAQT RLLTLEREKG HLRSQLQTAN EDTDNKKSDN
301: IDSNSMLENS LTAKEKIISE LNMEIHNVET ALANERESHV AEIKKLNSLL NKKDTIIEEM KKELQERPSA KLVDDLRKKV KILQAVGYNS IEAEDWDAAT
401: TGEEMSKMES LLLDKNRKME HEVTQLKVQL SEKASLLEKA EAKGEELTAK VNEQQRLIQK LEDDILKGYG SKERKGALFD EWEFSEAGVA EQSEPMDQKH
501: VPSEQDQSSM LKVICSQRDR FRARLRETEE EIRRLKEKIG FLTDELEKTK ADNVKLYGKI RYVQDYNHDK VVSRGSKKYV EDLESGFSSD VESKYKKIYE
601: DDINPFAAFS KKEREQRIKD LGIRDRITLS SGRFLLGNKY ARTFAFFYTI GLHVLVFTCL YRMSAYSYLS HGAEETLMTE ATTNLPHGL

Arabidopsis Description

CASPProtein CASP [Source:UniProtKB/Swiss-Prot;Acc:Q9LS42]
SUBAcon: [golgi,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.