Factsheet for Bra025906.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26161	Canola	mitochondrion	95.35	98.93
AT1G18420.1	Thale cress	mitochondrion	81.41	81.41
GSMUA_Achr7P18770_001	Banana	golgi, peroxisome, plasma membrane	51.81	57.01
GSMUA_Achr10P...	Banana	plasma membrane	51.64	55.87
KRH39212	Soybean	mitochondrion	56.8	55.18
KRH48465	Soybean	mitochondrion	56.11	54.7
KRH60327	Soybean	cytosol, golgi, plasma membrane	54.04	54.51
VIT_17s0000g03850.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	54.91	54.25
VIT_18s0122g00020.t01	Wine grape	endoplasmic reticulum, extracellular	19.79	54.25
OQU85465	Sorghum	golgi	47.85	53.67
Solyc06g072920.1.1	Tomato	endoplasmic reticulum, golgi	35.28	53.11
KRH60330	Soybean	plasma membrane	35.11	52.71
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	54.39	52.32
KRH41621	Soybean	golgi, peroxisome, plasma membrane	51.81	52.26
HORVU7Hr1G042480.1	Barley	endoplasmic reticulum, plasma membrane, plastid	50.6	51.85
Os06t0268800-01	Rice	cytosol, plasma membrane, plastid	34.42	51.55
KRH75405	Soybean	mitochondrion	48.71	51.08
PGSC0003DMT400069527	Potato	plasma membrane	49.4	51.07
Zm00001d010130_P001	Maize	cytosol	17.04	51.03
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	49.57	50.44
KRH45244	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	48.36	50.36
TraesCS7B01G116000.1	Wheat	endoplasmic reticulum, plastid, vacuole	50.77	50.26
TraesCS7A01G208700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	50.6	50.0
TraesCS7D01G211100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	50.6	50.0
Bra010995.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.57	49.83
KRG90790	Soybean	cytosol	47.33	49.73
KRH70564	Soybean	mitochondrion	46.99	49.55
PGSC0003DMT400033766	Potato	cytosol	45.78	49.53
KRH35972	Soybean	cytosol, peroxisome, plasma membrane	47.68	49.38
Bra024742.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	47.85	49.03
Bra002062.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.64	48.48
Zm00001d017928_P001	Maize	plasma membrane	49.57	48.4
Os02t0730600-00	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	47.85	47.6
Zm00001d045696_P001	Maize	mitochondrion, plastid	49.23	46.5
TraesCS7D01G221900.2	Wheat	cytosol, peroxisome, plasma membrane	46.47	46.47
TraesCS7A01G220200.1	Wheat	cytosol, peroxisome, vacuole	46.47	46.47
HORVU7Hr1G045290.1	Barley	extracellular, peroxisome, vacuole	46.3	46.22
TraesCS7B01G127200.2	Wheat	cytosol, peroxisome, vacuole	46.3	46.22
EER89585	Sorghum	plastid	48.71	45.94
Solyc06g072910.2.1	Tomato	peroxisome, plasma membrane, vacuole	12.74	45.12
HORVU6Hr1G072900.3	Barley	peroxisome	47.16	44.55
TraesCS6B01G321600.1	Wheat	plasma membrane	46.99	41.3
Zm00001d044350_P001	Maize	mitochondrion	13.6	37.62
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	25.47	30.2
Bra038672.1-P	Field mustard	plasma membrane	25.3	30.0
Bra012627.1-P	Field mustard	cytosol	27.02	29.35
Bra037402.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.58	29.09
Bra022048.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	26.51	28.52
Bra008542.1-P	Field mustard	plasma membrane	22.03	28.26
Bra030725.1-P	Field mustard	plasma membrane	23.06	27.24
Bra025011.1-P	Field mustard	plasma membrane	27.19	26.87
VIT_01s0011g03290.t01	Wine grape	plasma membrane	51.98	26.75
Bra034339.1-P	Field mustard	golgi	22.38	26.42
Bra030726.1-P	Field mustard	cytosol, golgi, plasma membrane	22.55	26.31
Bra000933.1-P	Field mustard	plasma membrane	23.58	25.95
Bra018625.1-P	Field mustard	cytosol, golgi, plasma membrane	22.38	25.59
Bra037581.1-P	Field mustard	golgi, mitochondrion, nucleus, plasma membrane	56.8	24.94
Os02t0673000-01	Rice	golgi, mitochondrion, plasma membrane	9.47	24.34

Protein Annotations

EnsemblPlants:Bra025906.1	EnsemblPlants:Bra025906.1-P	EnsemblPlantsGene:Bra025906	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015743	GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	ncoils:Coil	PANTHER:PTHR31086
PANTHER:PTHR31086:SF20	PFAM:PF11744	SEG:seg	TMHMM:TMhelix	UniParc:UPI000253F443	UniProt:M4EAU7
MapMan:24.3.11	:	:	:	:	:

Description

AT1G18420 (E=4e-251) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0005 (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: AtALMT9 (aluminum-activated malate transporter 9); anion channel (TAIR:AT3G18440.1); Has 336 Blast hits to 334 proteins in 83 species: Archae - 0; Bacteria - 112; Metazoa - 1; Fungi - 9; Plants - 203; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

Coordinates

chrA06:+:7081451..7083745

Molecular Weight (calculated)

64735.9 Da

IEP (calculated)

6.973

GRAVY (calculated)

0.003

Length

581 amino acids

Sequence
(BLAST)

001: MAAPKLESFR RGSMFDVSFR RSSMFDGSFR QSIRDRLLPH PTRDSFYPGE DKTPVRCCSY RYFSDKITGF VTKSQDVLVT AWEMGTSDPR KIIFSAKMGL
101: ALTLVSILVF FKLPGSELSN HYLWAILTIV VVFEFSIGAT FSKGCNRGLG TLSAGALALG MAEISALTGQ WAEVFNSVSI FVVAFFGTYA KLYPTMKPYE
201: YGFRVFLLTY CYVIVSGYRT GEFMETAVSR FLMIALGGGI GLLVNTCIYP IWAGDDLHNL IAKNFVNVAT SLEGCVNAYL NCVAYDTIPS KMLVYEAVTD
301: DPVYSGYRSA VQSTSQEDTL MGFASWEPPH GPYRSFRYPW KAYVKVGGAL RHCAFMVMAL HGCILSEIQA AEDKRSVFRN ELQIVGVEGA KVLRFIGEKL
401: KTMERLNPIE DILHEIHQAA EELQSKIDKK SYLLVNAETW EIGNRSKDLT DEIKISNLDE DVSRILAHKS QSEATIRPPK NWDVVTTTSK NPNPATIQSQ
501: QSRTAMQKQS SWPSRISLTP GSLLITPGDD DEAAKMYRSA SALSLATFAS LLIEFVARLE NLVNAYDELC EIANFKEAVI A

Best Arabidopsis Sequence Match ( AT1G18420.1 )
(BLAST)

001: MAAPKLESFR RGSMFDGSFR RGSMFDGSFR QSMRDRLILQ SRGYSNVNDD DKTSVRCCSY SYFSDKITGV VKKLKDVLVT AWEMGTADPR KMIFSAKMGL
101: ALTLTSILIF FKIPGLELSG HYLWAILTVV VIFEFSIGAT FSKGCNRGLG TLSAGGLALG MSWISEMTGN WADVFNAASI FVVAFFATYA KLYPTMKPYE
201: YGFRVFLLTY CYVIVSGYKT GEFMETAVSR FLLIALGASV GLIVNTCIYP IWAGEDLHNL VAKNFVNVAT SLEGCVNGYL ECVAYDTIPS RILVYEAVAE
301: DPVYSGYRSA VQSTSQEDTL MSFASWEPPH GPYKSFRYPW ALYVKVGGAL RHCAIMVMAL HGCILSEIQA AEDRRREFRN ELQRVGIEGA KVLRYIGESL
401: KKMEKLNPIE DILYEIHQAA EELQSKIDKK SYLLVNAKNW EIGNRPRVRD LTDEQKISNL DSDLSRILAH KSQSEATLRP PKNWDDVTTA ANLSSATMLP
501: YLQSRTMIHK QPSWPSRISI TPGSMLQPPL GEPGKMYESA SNLSLATFAS LLIEFVARLE NLVNAYDELS VKANFKEAVS E

Arabidopsis Description

ALMT3Putative aluminum-activated malate transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.