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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025906.1-P Field mustard mitochondrion 98.93 95.35
CDY19211 Canola mitochondrion 94.64 93.97
AT1G18420.1 Thale cress mitochondrion 81.25 78.31
CDX81872 Canola peroxisome, plastid, vacuole 36.43 70.59
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 53.93 57.2
GSMUA_Achr10P... Banana plasma membrane 53.57 55.87
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 20.71 54.72
KRH39212 Soybean mitochondrion 58.21 54.52
KRH48465 Soybean mitochondrion 57.5 54.03
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 56.43 53.74
KRH60327 Soybean cytosol, golgi, plasma membrane 55.0 53.47
OQU85465 Sorghum golgi 49.11 53.09
KRH60330 Soybean plasma membrane 36.61 52.97
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 35.89 51.8
KRH41621 Soybean golgi, peroxisome, plasma membrane 52.86 51.39
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 51.96 51.32
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 35.36 51.3
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 55.0 50.99
KRH75405 Soybean mitochondrion 50.0 50.54
CDY24338 Canola plasma membrane 32.32 50.14
Zm00001d010130_P001 Maize cytosol 17.32 50.0
PGSC0003DMT400069527 Potato plasma membrane 50.0 49.82
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 49.64 49.82
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 52.14 49.74
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 51.96 49.49
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 51.96 49.49
CDY36105 Canola cytosol, peroxisome, plasma membrane 50.36 49.47
CDY42102 Canola peroxisome 48.21 49.45
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 50.18 49.21
KRG90790 Soybean cytosol 48.57 49.19
CDY24400 Canola cytosol, peroxisome, plasma membrane 50.71 49.05
CDX84992 Canola peroxisome 47.68 48.9
KRH35972 Soybean cytosol, peroxisome, plasma membrane 48.93 48.84
KRH70564 Soybean mitochondrion 48.04 48.82
PGSC0003DMT400033766 Potato cytosol 46.43 48.42
CDY18521 Canola plasma membrane 56.96 47.97
Zm00001d017928_P001 Maize plasma membrane 50.89 47.9
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 48.75 46.75
Zm00001d045696_P001 Maize mitochondrion, plastid 50.54 46.02
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 47.5 45.78
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 47.5 45.78
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 13.39 45.73
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 47.32 45.53
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 47.32 45.53
EER89585 Sorghum plastid 50.0 45.45
HORVU6Hr1G072900.3 Barley peroxisome 48.21 43.9
TraesCS6B01G321600.1 Wheat plasma membrane 48.21 40.85
CDX97484 Canola plasma membrane 8.93 36.76
Zm00001d044350_P001 Maize mitochondrion 13.57 36.19
CDX87698 Canola plasma membrane 17.5 32.78
CDY52054 Canola cytosol, peroxisome, plasma membrane 25.36 32.72
CDX90432 Canola cytosol 28.39 30.29
CDY01048 Canola cytosol, golgi, plasma membrane 26.07 29.92
CDY08504 Canola cytosol, golgi, plasma membrane 26.07 29.86
CDY01507 Canola cytosol 27.86 29.83
CDY51721 Canola plasma membrane 24.82 29.51
CDY01945 Canola plasma membrane 24.82 29.14
CDY01943 Canola plasma membrane 24.82 29.14
CDY07155 Canola cytosol, peroxisome, plasma membrane 24.29 29.0
CDX77675 Canola cytosol, golgi, plasma membrane 27.86 28.78
CDY63048 Canola plasma membrane 28.21 28.68
CDX97239 Canola plasma membrane 24.64 28.51
CDX74373 Canola plasma membrane 24.29 28.51
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 26.96 27.96
CDX97483 Canola plasma membrane 23.39 27.7
CDX91864 Canola plasma membrane 24.82 27.52
CDY31147 Canola plasma membrane 24.11 27.38
VIT_01s0011g03290.t01 Wine grape plasma membrane 53.93 26.75
CDY31146 Canola cytosol, golgi, plasma membrane 23.39 26.31
CDX95060 Canola cytosol, golgi, plasma membrane 23.75 26.18
CDX97489 Canola cytosol, golgi, plasma membrane 23.57 26.04
CDX93562 Canola cytosol, golgi, plasma membrane 23.39 25.79
CDY30563 Canola plasma membrane 23.21 25.44
CDX97487 Canola plasma membrane 17.5 25.39
CDX77103 Canola golgi 22.86 25.05
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 57.5 24.86
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 9.82 24.34
CDX87700 Canola cytosol 10.71 22.56
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 11.79 20.56
CDX97488 Canola endoplasmic reticulum 0.0 0.0
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY26161EnsemblPlantsGene:GSBRNA2T00034815001GO:A0A078GLF1GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTncoils:CoilPANTHER:PTHR31086
PANTHER:PTHR31086:SF20PFAM:PF11744ProteinID:CDY26161ProteinID:CDY26161.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EE946DUniProt:A0A078GLF1MapMan:24.3.11:::
Description
BnaA06g12560DBnaA06g12560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLF1]
Coordinates
chrLK032186:-:33603..35902
Molecular Weight (calculated)
62451.1 Da
IEP (calculated)
6.708
GRAVY (calculated)
0.006
Length
560 amino acids
Sequence
(BLAST)
001: MAAPKLESFR RGSMFDVSFR RSSMFDGSFR QSIRDRLLPH PTRDSFYPGE DKTPVRCCSY RYFSDKITGF VTKSQDVLVT AWEMGTSDPR KIIFSAKMGL
101: ALTLVSILVF FKLPGSELSN HYLWAILTIV VVFEFSIGAT FSKGCNRGLG TLSAGALALG MAEISALTGK WAEVFNSVSI FVVAFFGTYA KLYPTMKPYE
201: YGFRVFLLTY CYVIVSGYRT GEFMETAVSR FLMIALGGGI GLLVNTCIYP IWAGDDLHNL IAKNFVNVAT SLEGCVNAYL NCVAYDTIPS KMLVYEAVTD
301: DPVYSGYRSA VQSTSQEDTL MGFASWEPPH GPYRSFRYPW KAYVKVGGAL RHCAFMVMAL HGCILSEIQA AEDKRSVFRN ELQRVGVEGA KVLRFIGEKL
401: KTMERLNPIE DILHEIHQAA EELQSKIDKK SYLLVNAETW EIGNRSKDLT DDLKISNLDE DNWDVVTTTS KNPIPATIQS QQSRTAMQKQ SSWPSRISLT
501: PGSLLITPGD DDEAAKMYRS ASALSLATFA SLLIEFVARL ENLVNAYDEL CEIANFKEAA
Best Arabidopsis Sequence Match ( AT1G18420.1 )
(BLAST)
001: MAAPKLESFR RGSMFDGSFR RGSMFDGSFR QSMRDRLILQ SRGYSNVNDD DKTSVRCCSY SYFSDKITGV VKKLKDVLVT AWEMGTADPR KMIFSAKMGL
101: ALTLTSILIF FKIPGLELSG HYLWAILTVV VIFEFSIGAT FSKGCNRGLG TLSAGGLALG MSWISEMTGN WADVFNAASI FVVAFFATYA KLYPTMKPYE
201: YGFRVFLLTY CYVIVSGYKT GEFMETAVSR FLLIALGASV GLIVNTCIYP IWAGEDLHNL VAKNFVNVAT SLEGCVNGYL ECVAYDTIPS RILVYEAVAE
301: DPVYSGYRSA VQSTSQEDTL MSFASWEPPH GPYKSFRYPW ALYVKVGGAL RHCAIMVMAL HGCILSEIQA AEDRRREFRN ELQRVGIEGA KVLRYIGESL
401: KKMEKLNPIE DILYEIHQAA EELQSKIDKK SYLLVNAKNW EIGNRPRVRD LTDEQKISNL DSDLSRILAH KSQSEATLRP PKNWDDVTTA ANLSSATMLP
501: YLQSRTMIHK QPSWPSRISI TPGSMLQPPL GEPGKMYESA SNLSLATFAS LLIEFVARLE NLVNAYDELS VKANFKEAVS E
Arabidopsis Description
ALMT3Putative aluminum-activated malate transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPQ8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.