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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84992 Canola peroxisome 98.53 98.53
Bra024742.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 99.82 96.12
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 87.36 87.04
CDY36105 Canola cytosol, peroxisome, plasma membrane 89.19 85.44
CDY24400 Canola cytosol, peroxisome, plasma membrane 89.93 84.8
CDY24338 Canola plasma membrane 45.97 69.53
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 24.36 62.74
KRH75405 Soybean mitochondrion 61.17 60.29
KRG90790 Soybean cytosol 60.99 60.22
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 60.81 59.5
KRH70564 Soybean mitochondrion 59.89 59.35
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 41.39 58.55
KRH35972 Soybean cytosol, peroxisome, plasma membrane 60.07 58.47
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 54.76 56.63
GSMUA_Achr10P... Banana plasma membrane 54.03 54.93
PGSC0003DMT400069527 Potato plasma membrane 55.86 54.27
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 56.23 53.77
KRH60327 Soybean cytosol, golgi, plasma membrane 55.68 52.78
OQU85465 Sorghum golgi 50.0 52.7
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.86 51.87
KRH39212 Soybean mitochondrion 55.86 51.0
KRH48465 Soybean mitochondrion 55.49 50.84
KRH60330 Soybean plasma membrane 35.53 50.13
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 52.01 50.09
KRH41621 Soybean golgi, peroxisome, plasma membrane 52.75 50.0
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 53.3 49.49
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 34.98 49.23
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.93 49.15
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 52.75 49.06
CDY26161 Canola mitochondrion 49.45 48.21
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 53.11 48.01
Zm00001d010130_P001 Maize cytosol 17.03 47.94
CDY19211 Canola mitochondrion 49.45 47.87
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 50.0 46.75
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 49.45 46.47
Zm00001d017928_P001 Maize plasma membrane 50.55 46.39
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 13.92 46.34
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 49.27 46.3
PGSC0003DMT400033766 Potato cytosol 45.24 46.0
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 48.9 45.88
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 48.9 45.88
Zm00001d045696_P001 Maize mitochondrion, plastid 51.28 45.53
EER89585 Sorghum plastid 50.73 44.97
CDY18521 Canola plasma membrane 54.21 44.51
HORVU6Hr1G072900.3 Barley peroxisome 48.35 42.93
CDX81872 Canola peroxisome, plastid, vacuole 21.61 40.83
TraesCS6B01G321600.1 Wheat plasma membrane 47.62 39.33
Zm00001d044350_P001 Maize mitochondrion 13.55 35.24
CDX97484 Canola plasma membrane 8.61 34.56
VIT_01s0011g03290.t01 Wine grape plasma membrane 65.57 31.71
CDX87698 Canola plasma membrane 17.22 31.44
CDY52054 Canola cytosol, peroxisome, plasma membrane 24.73 31.11
CDY51721 Canola plasma membrane 25.46 29.51
CDX90432 Canola cytosol 28.02 29.14
CDY01507 Canola cytosol 27.66 28.87
CDY07155 Canola cytosol, peroxisome, plasma membrane 24.73 28.78
CDX77675 Canola cytosol, golgi, plasma membrane 28.39 28.6
CDY63048 Canola plasma membrane 28.57 28.31
CDX74373 Canola plasma membrane 24.73 28.3
CDY01945 Canola plasma membrane 24.36 27.88
CDY01943 Canola plasma membrane 24.36 27.88
CDY01048 Canola cytosol, golgi, plasma membrane 24.91 27.87
CDY08504 Canola cytosol, golgi, plasma membrane 24.91 27.81
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 27.29 27.59
CDX97239 Canola plasma membrane 24.36 27.48
CDX91864 Canola plasma membrane 24.91 26.93
CDX97483 Canola plasma membrane 22.71 26.22
CDY31146 Canola cytosol, golgi, plasma membrane 22.89 25.1
CDX95060 Canola cytosol, golgi, plasma membrane 23.26 25.0
CDX93562 Canola cytosol, golgi, plasma membrane 23.08 24.8
CDY31147 Canola plasma membrane 22.34 24.75
CDY30563 Canola plasma membrane 23.08 24.66
CDX77103 Canola golgi 23.08 24.66
CDX97489 Canola cytosol, golgi, plasma membrane 22.89 24.65
CDX97487 Canola plasma membrane 16.48 23.32
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 54.03 22.78
CDX87700 Canola cytosol 10.62 21.8
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 8.61 20.8
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 11.72 19.94
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
CDX97488 Canola endoplasmic reticulum 0.0 0.0
Protein Annotations
EnsemblPlants:CDY42102EnsemblPlantsGene:GSBRNA2T00074270001GO:A0A078HWC0GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTncoils:CoilPANTHER:PTHR31086
PANTHER:PTHR31086:SF20PFAM:PF11744ProteinID:CDY42102ProteinID:CDY42102.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EE287EUniProt:A0A078HWC0MapMan:24.3.11:::
Description
BnaA09g28580DBnaA09g28580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWC0]
Coordinates
chrLK032515:-:44129..47397
Molecular Weight (calculated)
61523.9 Da
IEP (calculated)
7.302
GRAVY (calculated)
-0.062
Length
546 amino acids
Sequence
(BLAST)
001: MFGDQTRDAL LSRKGCSDFG FNDSGIISDD RRSKWRLYEM GRSDRRKVYF AVKMGVALAL CSFVIYLKEP LHDASKYAVW AILTVVVVFE YSIGATLVKG
101: FNRAIGTLSA GGLALGIARL SVLAGRFEEE IIIVSIFLAG LCASYLKLYP AMKSYEYAFR VFLLTFCIVL VSGNNSRDFF STAYFRFLLI CVGACICLGV
201: NIFILPIWSG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV WEPPHGPYRT FHHPWANYVK
301: LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRHELQRV GNEGAKVLRL FAEKVEKMEK LSLGNILKDV QRAAEELQMK IDKNSFLLVN SESWAAMKEK
401: ADAEEAQENY HESKDDETKV FQTLSQIWDT NTNHHQNPHN GNDSHLWIST ESMMLRNREQ WPSVSFIGGN MINEIESKVY ESASSLSLAT FASLLIEFVA
501: RLQNVVNAFE ELSTKAGFKE PVSETPKKID KAGFWTRLSS CFSSRA
Best Arabidopsis Sequence Match ( AT1G25480.1 )
(BLAST)
001: MADQTREAFL SRKACSDFGF NDSNIIDDRR SKFRCFRFCS DGITASWKAL YDIGAKLYEM GRSDRRKVYF SVKMGMALAL CSFVIYLKEP LRDASKYAVW
101: AILTVVVVFE YSIGATLVKG FNRAIGTLSA GGLALGIARL SVSAGEFEEL IIIISIFIAG FSASYLKLYP AMKSYEYAFR VFLLTYCIVL VSGNNSRDFF
201: STAYYRFLLI LVGAGICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV
301: WEPPHGPYKT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSPGNVLKDV QRAAEELQMK
401: IDSNSFLLVN SESWAAMKEK AEAEEAQQNY HEAKDDESKV IQSLSQIWDN NNNPHHQNQH AGNDSQLWIS TESMMLRNRE NWPSVSFIGG SMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNIVNAY EELSTKADFK EQVSETRI
Arabidopsis Description
ALMT4Aluminum-activated malate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.