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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, extracellular, vacuole

Predictor Summary:
  • extracellular 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, peroxisome, vacuole
Any Predictor:extracellular, vacuole
MultiLoc:extracellular
WoLF PSORT:vacuole
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 94.33 94.49
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 94.33 94.33
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 93.3 93.46
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 75.77 77.78
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 46.91 70.36
Zm00001d010130_P001 Maize cytosol 22.51 67.53
EER89585 Sorghum plastid 70.79 66.88
Zm00001d045696_P001 Maize mitochondrion, plastid 70.1 66.34
Zm00001d044350_P001 Maize mitochondrion 21.31 59.05
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 51.2 56.44
HORVU6Hr1G072900.3 Barley peroxisome 58.42 55.28
GSMUA_Achr10P... Banana plasma membrane 50.69 54.93
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 19.76 54.25
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 33.33 50.26
KRH39212 Soybean mitochondrion 51.2 49.83
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 50.17 49.66
KRH60327 Soybean cytosol, golgi, plasma membrane 48.97 49.48
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 47.25 49.28
KRH75405 Soybean mitochondrion 46.91 49.28
KRH70564 Soybean mitochondrion 46.39 49.0
CDY42102 Canola peroxisome 45.88 48.9
AT1G68600.1 Thale cress cytosol, golgi, plasma membrane 45.02 48.79
CDY24338 Canola plasma membrane 30.24 48.75
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 45.7 48.54
KRH48465 Soybean mitochondrion 49.66 48.49
CDX84992 Canola peroxisome 45.36 48.35
Bra024742.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 46.91 48.15
KRG90790 Soybean cytosol 45.7 48.1
KRH60330 Soybean plasma membrane 31.96 48.06
Solyc03g096820.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 46.74 47.64
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 46.56 47.46
CDY36105 Canola cytosol, peroxisome, plasma membrane 46.39 47.37
CDY19211 Canola mitochondrion 45.88 47.34
CDY26161 Canola mitochondrion 45.53 47.32
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 46.74 47.06
KRH41621 Soybean golgi, peroxisome, plasma membrane 46.56 47.05
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 48.8 47.02
Solyc03g119640.2.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 49.14 46.96
KRH35972 Soybean cytosol, peroxisome, plasma membrane 44.85 46.52
AT3G18440.1 Thale cress plasma membrane 47.77 46.49
CDY24400 Canola cytosol, peroxisome, plasma membrane 46.22 46.46
Bra002062.1-P Field mustard cytosol, peroxisome, plasma membrane 44.5 46.33
Bra025906.1-P Field mustard mitochondrion 46.22 46.3
PGSC0003DMT400069527 Potato plasma membrane 44.67 46.26
AT1G18420.1 Thale cress mitochondrion 46.05 46.13
AT2G17470.2 Thale cress cytosol 44.33 46.07
Solyc05g009590.2.1 Tomato plasma membrane 40.21 44.66
PGSC0003DMT400033766 Potato cytosol 39.69 43.02
Solyc05g009580.2.1 Tomato cytosol 39.69 42.78
CDX81872 Canola peroxisome, plastid, vacuole 21.13 42.56
CDY18521 Canola plasma membrane 47.94 41.95
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 11.0 39.02
HORVU1Hr1G049820.21 Barley endoplasmic reticulum, peroxisome 26.29 28.02
VIT_01s0011g03290.t01 Wine grape plasma membrane 49.83 25.69
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 20.62 25.26
HORVU2Hr1G095430.2 Barley plasma membrane 4.98 23.77
HORVU7Hr1G081320.3 Barley peroxisome 24.4 21.75
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 47.59 21.39
Bra037581.1-P Field mustard golgi, mitochondrion, nucleus, plasma membrane 47.77 21.01
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EMBL:AK356354EnsemblPlants:HORVU7Hr1G045290.1EnsemblPlantsGene:HORVU7Hr1G045290GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF23
PFAM:PF11744SEG:segTMHMM:TMhelixUniParc:UPI0002004A22UniProt:F2CXK1MapMan:24.3.11
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CXK1]
Coordinates
chrchr7H:+:142881393..142886271
Molecular Weight (calculated)
63249.8 Da
IEP (calculated)
6.584
GRAVY (calculated)
0.024
Length
582 amino acids
Sequence
(BLAST)
001: MGMGAAAAAL LPPAEQWLTL EDQRCGECPL LSSAWSLPGP PEEGAGNAKQ GVLRRAAARA WGALAAAAAE ASALARADPR KPVFAAKVAL AIALMSLLAF
101: VREPRDFVSH SVWALLTAVV VFEFSIGATL CRGFNRGLGT LTAGGLALAI AESAKNLGEM EEVIIVVSTF TVGFCTTLAK QHPKMKPYEY GFRVFLLTFG
201: YVMVSGYSTG KFTDTAVNRF VFIALGAGVS LAINIGICPI WAGEDLHNLV AKNFAGVANS LEGCVDEYLK CMEYERISSR ILLYQASDDP LYSGYRAAIE
301: ASAQEQTLLD DAIWEPPHGP YKTMSYPWKS FTKVGGALRH CSFAAMALHG CILSEIQAPP ESRKVFSSEI HKVGRECSKV LRELGNNVKT MTKLNSSDIL
401: FEVHLAAEEL QKKIDENSYL LVNTEAWHTN KRADGMRDAM NATLVAGREN KNDAMEPTIA DQTLAYHYKT FAASSFRSRY DSSSTIDGYK KLPHWPARTS
501: FYPNLPLEDT ESKTYQSASA LSLATFASLL IEFVARLQNV VYAFEELSDK ANFKELVEEP VAVGKGDGGF VATMCKLVGL RS
Best Arabidopsis Sequence Match ( AT3G18440.1 )
(BLAST)
001: MAAKQGSFRH GILEKRERLL SNNGFSDFRF TDIESNDLLE NENCGRRTRL CCCCSCGNLS EKISGVYDDA KDVARKAWEM GVSDPRKIVF SAKIGLALTI
101: VALLIFYQEP NPDLSRYSVW AILTVVVVFE FTIGATLSKG FNRALGTLSA GGLALGMAEL STLFGDWEEI FCTLSIFCIG FLATFMKLYP SMKAYEYGFR
201: VFLLTYCYIL ISGFRTGQFI EVAISRFLLI ALGAGVSLGV NMFIYPIWAG EDLHNLVVKN FMNVATSLEG CVNGYLRCLE YERIPSKILT YQASEDPVYK
301: GYRSAVESTS QEESLMSFAI WEPPHGPYKS FNYPWKNYVK LSGALKHCAF TVMALHGCIL SEIQAPEERR QVFRQELQRV GVEGAKLLRE LGEKVKKMEK
401: LGPVDLLFEV HLAAEELQHK IDKKSYLLVN SECWEIGNRA TKESEPQELL SLEDSDPPEN HAPPIYAFKS LSEAVLEIPP SWGEKNHREA LNHRPTFSKQ
501: VSWPARLVLP PHLETTNGAS PLVETTKTYE SASALSLATF ASLLIEFVAR LQNVVDAFKE LSQKANFKEP EIVTTGTDVE FSGERVGLGQ KIRRCFGM
Arabidopsis Description
ALMT9Aluminum-activated malate transporter 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS46]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.