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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400033766 Potato cytosol 97.04 97.58
Solyc05g009590.2.1 Tomato plasma membrane 77.41 79.77
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 47.78 48.86
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 33.52 46.89
GSMUA_Achr10P... Banana plasma membrane 46.11 46.37
Solyc03g096820.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 48.52 45.88
OQU85465 Sorghum golgi 43.52 45.37
Solyc03g119640.2.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 50.56 44.83
Zm00001d010130_P001 Maize cytosol 15.19 42.27
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 29.44 40.98
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 12.41 40.85
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 42.41 40.39
Zm00001d017928_P001 Maize plasma membrane 44.07 40.0
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 42.78 39.69
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 42.78 39.55
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 42.96 39.46
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 42.41 39.41
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 42.78 39.35
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 42.78 39.29
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 42.04 39.07
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 42.04 39.0
EER89585 Sorghum plastid 43.52 38.15
Zm00001d045696_P001 Maize mitochondrion, plastid 43.33 38.05
HORVU6Hr1G072900.3 Barley peroxisome 42.04 36.91
TraesCS6B01G321600.1 Wheat plasma membrane 42.04 34.34
Zm00001d044350_P001 Maize mitochondrion 12.96 33.33
Solyc09g065070.1.1 Tomato peroxisome 24.81 30.95
Solyc08g006990.1.1 Tomato cytosol, peroxisome, plasma membrane 30.19 30.64
Solyc08g082950.2.1 Tomato plasma membrane 26.85 30.46
Solyc06g061100.2.1 Tomato plasma membrane 28.52 29.5
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 25.37 29.34
Solyc06g074100.1.1 Tomato plasma membrane 24.63 28.48
Solyc11g071350.1.1 Tomato nucleus 23.15 27.9
Solyc10g081890.1.1 Tomato nucleus 24.63 27.82
Solyc01g096140.2.1 Tomato cytosol, peroxisome, plasma membrane 24.81 26.91
Solyc01g007080.2.1 Tomato peroxisome 22.78 25.89
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 9.26 22.12
Solyc01g007090.1.1 Tomato cytosol 23.52 20.42
Protein Annotations
MapMan:24.3.11InterPro:ALMTncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0008150
GO:GO:0009705GO:GO:0015140GO:GO:0015743GO:GO:0016020GO:GO:0016021GO:GO:0071423
UniProt:K4BXD2PFAM:PF11744PANTHER:PTHR31086PANTHER:PTHR31086:SF18EnsemblPlantsGene:Solyc05g009580.2EnsemblPlants:Solyc05g009580.2.1
TMHMM:TMhelixUniParc:UPI0002766A7ASEG:seg:::
Description
No Description!
Coordinates
chr5:+:3773293..3777228
Molecular Weight (calculated)
61041.8 Da
IEP (calculated)
7.429
GRAVY (calculated)
-0.070
Length
540 amino acids
Sequence
(BLAST)
001: MVTIKNFFKK ASQDQYNQEK EKLLQHDDDE IKNGCCCFTP LYEKLKSFFN NIQDFAEKAI EMGKNDPRKI IFSLKMGFAL SFVSLLIFWK KPTDVAQFAI
101: WAILTVLVMF EFTIGATFIK GFNRGLGTFC AGMLAFIFAQ LALWAGEREK AVIVVSIFIV AFIGTYLKLY PTMAPYEYGY RVFILTYCIL IVAGNRTREY
201: NVAIFTRLAL IAVGAGICLM INISVCPIWA GEDLHRLVVK NFMDLATSLE GCINGYLSCV DYDEATNDSD YNGYKSVIES TSREQTLLGF AIWEPPHGRF
301: KMHKKPWRDI VKLSSGLRHC AFMVMALHGC IQSEIQAPPE KRKVFRNELK KVGTNAAKVL RELGTKLEKL EMLNGHENIL KEVHETAQNL QQKVDHKSYL
401: LVNSKSWEIG KSNINNNNNN LDDSSSENSS SENIPLSSRS LSETAIDIRL LQGNWPQSDQ LVAKLTPFKK QNQWPSRLSL VDGEIADTIE METYLSASAL
501: SLATFASLLI ELVARLQNVV DNFEELSQRA EFKESSSVKS
Best Arabidopsis Sequence Match ( AT3G18440.1 )
(BLAST)
001: MAAKQGSFRH GILEKRERLL SNNGFSDFRF TDIESNDLLE NENCGRRTRL CCCCSCGNLS EKISGVYDDA KDVARKAWEM GVSDPRKIVF SAKIGLALTI
101: VALLIFYQEP NPDLSRYSVW AILTVVVVFE FTIGATLSKG FNRALGTLSA GGLALGMAEL STLFGDWEEI FCTLSIFCIG FLATFMKLYP SMKAYEYGFR
201: VFLLTYCYIL ISGFRTGQFI EVAISRFLLI ALGAGVSLGV NMFIYPIWAG EDLHNLVVKN FMNVATSLEG CVNGYLRCLE YERIPSKILT YQASEDPVYK
301: GYRSAVESTS QEESLMSFAI WEPPHGPYKS FNYPWKNYVK LSGALKHCAF TVMALHGCIL SEIQAPEERR QVFRQELQRV GVEGAKLLRE LGEKVKKMEK
401: LGPVDLLFEV HLAAEELQHK IDKKSYLLVN SECWEIGNRA TKESEPQELL SLEDSDPPEN HAPPIYAFKS LSEAVLEIPP SWGEKNHREA LNHRPTFSKQ
501: VSWPARLVLP PHLETTNGAS PLVETTKTYE SASALSLATF ASLLIEFVAR LQNVVDAFKE LSQKANFKEP EIVTTGTDVE FSGERVGLGQ KIRRCFGM
Arabidopsis Description
ALMT9Aluminum-activated malate transporter 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS46]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.